Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CPS1P31327 AC004910.1-201ENST00000433493 787 ntBASIC19.71■□□□□ 0.75
CPS1P31327 AC007881.1-201ENST00000437460 187 ntBASIC19.71■□□□□ 0.75
CPS1P31327 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC19.71■□□□□ 0.75
CPS1P31327 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC19.71■□□□□ 0.75
CPS1P31327 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC19.71■□□□□ 0.75
CPS1P31327 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC19.71■□□□□ 0.75
CPS1P31327 AC148476.1-201ENST00000622182 705 ntBASIC19.71■□□□□ 0.75
CPS1P31327 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC19.71■□□□□ 0.75
CPS1P31327 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CPS1P31327 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC19.71■□□□□ 0.75
CPS1P31327 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC19.71■□□□□ 0.75
CPS1P31327 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC19.71■□□□□ 0.75
CPS1P31327 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CPS1P31327 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CPS1P31327 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 TBC1D27-202ENST00000424239 1573 ntBASIC19.71■□□□□ 0.75
CPS1P31327 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.71■□□□□ 0.75
CPS1P31327 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CPS1P31327 AC090505.1-201ENST00000430515 1834 ntBASIC19.71■□□□□ 0.75
CPS1P31327 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 AC023157.3-201ENST00000619086 2088 ntBASIC19.71■□□□□ 0.75
CPS1P31327 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CPS1P31327 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC19.71■□□□□ 0.75
CPS1P31327 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CPS1P31327 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CPS1P31327 SNORD88B-201ENST00000408454 91 ntBASIC19.71■□□□□ 0.75
CPS1P31327 CETN3-205ENST00000522842 664 ntTSL 2 BASIC19.71■□□□□ 0.75
CPS1P31327 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC19.71■□□□□ 0.75
CPS1P31327 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CPS1P31327 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 RPS5-205ENST00000598495 800 ntTSL 3 BASIC19.71■□□□□ 0.75
CPS1P31327 AL049840.2-201ENST00000602722 535 ntBASIC19.71■□□□□ 0.75
CPS1P31327 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CPS1P31327 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPS1P31327 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
CPS1P31327 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 AC015909.5-201ENST00000624336 2266 ntBASIC19.7■□□□□ 0.74
CPS1P31327 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.7■□□□□ 0.74
CPS1P31327 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC19.7■□□□□ 0.74
CPS1P31327 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CPS1P31327 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CPS1P31327 FAM86FP-201ENST00000338711 969 ntBASIC19.7■□□□□ 0.74
CPS1P31327 RNA5SP491-201ENST00000362936 118 ntBASIC19.7■□□□□ 0.74
CPS1P31327 WDR54-202ENST00000409791 854 ntTSL 3 BASIC19.7■□□□□ 0.74
CPS1P31327 DNM1P46-202ENST00000415963 882 ntBASIC19.7■□□□□ 0.74
CPS1P31327 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC19.7■□□□□ 0.74
CPS1P31327 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC19.7■□□□□ 0.74
CPS1P31327 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC19.7■□□□□ 0.74
CPS1P31327 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC19.7■□□□□ 0.74
CPS1P31327 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC19.7■□□□□ 0.74
CPS1P31327 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CPS1P31327 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
CPS1P31327 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC19.7■□□□□ 0.74
CPS1P31327 AC092384.3-202ENST00000564646 2873 ntBASIC19.7■□□□□ 0.74
CPS1P31327 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPS1P31327 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC19.69■□□□□ 0.74
CPS1P31327 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 SALL4P6-201ENST00000429385 1691 ntBASIC19.69■□□□□ 0.74
CPS1P31327 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPS1P31327 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC19.69■□□□□ 0.74
CPS1P31327 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC19.69■□□□□ 0.74
CPS1P31327 GYG1-209ENST00000483267 801 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms