Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14□□□□□ -0.17
HOXA6P31267 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 AC023141.7-201ENST00000430646 407 ntBASIC14□□□□□ -0.17
HOXA6P31267 BCL2L12P1-201ENST00000508390 733 ntBASIC14□□□□□ -0.17
HOXA6P31267 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC14□□□□□ -0.17
HOXA6P31267 URB1-AS1-201ENST00000534991 831 ntBASIC14□□□□□ -0.17
HOXA6P31267 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14□□□□□ -0.17
HOXA6P31267 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC14□□□□□ -0.17
HOXA6P31267 AL049840.2-201ENST00000602722 535 ntBASIC14□□□□□ -0.17
HOXA6P31267 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 AC099063.4-201ENST00000641099 1602 ntBASIC14□□□□□ -0.17
HOXA6P31267 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14□□□□□ -0.17
HOXA6P31267 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC13.99□□□□□ -0.17
HOXA6P31267 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.99□□□□□ -0.17
HOXA6P31267 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.99□□□□□ -0.17
HOXA6P31267 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.99□□□□□ -0.17
HOXA6P31267 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HOXA6P31267 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC13.99□□□□□ -0.17
HOXA6P31267 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HOXA6P31267 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HOXA6P31267 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 CTSL-202ENST00000342020 933 ntTSL 2 BASIC13.99□□□□□ -0.17
HOXA6P31267 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC13.99□□□□□ -0.17
HOXA6P31267 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.99□□□□□ -0.17
HOXA6P31267 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.99□□□□□ -0.17
HOXA6P31267 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.99□□□□□ -0.17
HOXA6P31267 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.99□□□□□ -0.17
HOXA6P31267 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.99□□□□□ -0.17
HOXA6P31267 RN7SL605P-201ENST00000577229 281 ntBASIC13.99□□□□□ -0.17
HOXA6P31267 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC13.99□□□□□ -0.17
HOXA6P31267 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.99□□□□□ -0.17
HOXA6P31267 AC113385.2-201ENST00000614465 762 ntBASIC13.99□□□□□ -0.17
HOXA6P31267 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HOXA6P31267 AL354702.1-201ENST00000442006 1960 ntBASIC13.99□□□□□ -0.17
HOXA6P31267 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.99□□□□□ -0.17
HOXA6P31267 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HOXA6P31267 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HOXA6P31267 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXA6P31267 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.99□□□□□ -0.17
HOXA6P31267 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.98□□□□□ -0.17
HOXA6P31267 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.98□□□□□ -0.17
HOXA6P31267 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.98□□□□□ -0.17
HOXA6P31267 WASH7P-201ENST00000488147 1351 ntBASIC13.98□□□□□ -0.17
HOXA6P31267 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.98□□□□□ -0.17
HOXA6P31267 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC13.98□□□□□ -0.17
HOXA6P31267 AC020931.1-201ENST00000589622 1346 ntBASIC13.98□□□□□ -0.17
HOXA6P31267 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.98□□□□□ -0.17
HOXA6P31267 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.98□□□□□ -0.17
HOXA6P31267 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms