Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VARSP26640 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.34□□□□□ -0.11
VARSP26640 AC105206.1-202ENST00000314927 2368 ntBASIC14.34□□□□□ -0.11
VARSP26640 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VARSP26640 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VARSP26640 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.34□□□□□ -0.11
VARSP26640 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.34□□□□□ -0.11
VARSP26640 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.34□□□□□ -0.11
VARSP26640 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.34□□□□□ -0.11
VARSP26640 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
VARSP26640 GPAA1P2-201ENST00000417923 928 ntBASIC14.34□□□□□ -0.11
VARSP26640 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.34□□□□□ -0.11
VARSP26640 AP003171.2-201ENST00000528208 925 ntBASIC14.34□□□□□ -0.11
VARSP26640 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.34□□□□□ -0.11
VARSP26640 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VARSP26640 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.34□□□□□ -0.11
VARSP26640 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.34□□□□□ -0.11
VARSP26640 AC106820.3-201ENST00000561653 397 ntBASIC14.34□□□□□ -0.11
VARSP26640 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.34□□□□□ -0.11
VARSP26640 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.34□□□□□ -0.11
VARSP26640 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 OR10B1P-201ENST00000601666 907 ntBASIC14.34□□□□□ -0.11
VARSP26640 AC121493.1-201ENST00000602316 450 ntBASIC14.34□□□□□ -0.11
VARSP26640 AC138951.2-201ENST00000623455 1161 ntBASIC14.34□□□□□ -0.11
VARSP26640 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.34□□□□□ -0.11
VARSP26640 MRPL37P1-201ENST00000592451 1337 ntBASIC14.34□□□□□ -0.11
VARSP26640 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
VARSP26640 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VARSP26640 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VARSP26640 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VARSP26640 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
VARSP26640 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
VARSP26640 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VARSP26640 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VARSP26640 AL118506.1-201ENST00000601296 3082 ntBASIC14.33□□□□□ -0.11
VARSP26640 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VARSP26640 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
VARSP26640 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.33□□□□□ -0.11
VARSP26640 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VARSP26640 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VARSP26640 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.33□□□□□ -0.12
VARSP26640 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VARSP26640 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VARSP26640 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
VARSP26640 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.33□□□□□ -0.12
VARSP26640 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
VARSP26640 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
VARSP26640 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.33□□□□□ -0.12
VARSP26640 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.33□□□□□ -0.12
VARSP26640 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC14.33□□□□□ -0.12
VARSP26640 GCOM2-201ENST00000509133 1104 ntBASIC14.33□□□□□ -0.12
VARSP26640 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.33□□□□□ -0.12
VARSP26640 RN7SL560P-201ENST00000577943 264 ntBASIC14.33□□□□□ -0.12
VARSP26640 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.33□□□□□ -0.12
VARSP26640 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.33□□□□□ -0.12
VARSP26640 AL139099.5-201ENST00000635274 300 ntBASIC14.33□□□□□ -0.12
VARSP26640 AC008687.7-202ENST00000637404 953 ntBASIC14.33□□□□□ -0.12
VARSP26640 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
VARSP26640 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VARSP26640 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VARSP26640 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.33□□□□□ -0.12
VARSP26640 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.33□□□□□ -0.12
VARSP26640 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms