Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ERCC3P19447 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.75■□□□□ 0.27
ERCC3P19447 RNA5SP359-201ENST00000364838 113 ntBASIC16.75■□□□□ 0.27
ERCC3P19447 MIR557-201ENST00000385239 98 ntBASIC16.75■□□□□ 0.27
ERCC3P19447 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ERCC3P19447 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.75■□□□□ 0.27
ERCC3P19447 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.75■□□□□ 0.27
ERCC3P19447 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.75■□□□□ 0.27
ERCC3P19447 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.75■□□□□ 0.27
ERCC3P19447 AL031713.1-201ENST00000564813 661 ntBASIC16.75■□□□□ 0.27
ERCC3P19447 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.75■□□□□ 0.27
ERCC3P19447 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.75■□□□□ 0.27
ERCC3P19447 SIGLEC18P-201ENST00000602271 909 ntBASIC16.75■□□□□ 0.27
ERCC3P19447 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ERCC3P19447 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
ERCC3P19447 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.75■□□□□ 0.27
ERCC3P19447 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.75■□□□□ 0.27
ERCC3P19447 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ERCC3P19447 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.75■□□□□ 0.27
ERCC3P19447 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.75■□□□□ 0.27
ERCC3P19447 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.75■□□□□ 0.27
ERCC3P19447 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.75■□□□□ 0.27
ERCC3P19447 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC3P19447 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC3P19447 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC3P19447 KRT18P9-201ENST00000604826 1300 ntBASIC16.74■□□□□ 0.27
ERCC3P19447 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC3P19447 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC3P19447 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC3P19447 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC3P19447 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC3P19447 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.74■□□□□ 0.27
ERCC3P19447 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.74■□□□□ 0.27
ERCC3P19447 OR2R1P-201ENST00000441404 914 ntBASIC16.74■□□□□ 0.27
ERCC3P19447 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.74■□□□□ 0.27
ERCC3P19447 RPL7P35-201ENST00000446943 740 ntBASIC16.74■□□□□ 0.27
ERCC3P19447 RPSAP15-201ENST00000448168 861 ntBASIC16.74■□□□□ 0.27
ERCC3P19447 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 PGAM1P5-201ENST00000548011 764 ntBASIC16.74■□□□□ 0.27
ERCC3P19447 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC3P19447 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.74■□□□□ 0.27
ERCC3P19447 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC3P19447 AC007881.3-201ENST00000608897 607 ntBASIC16.74■□□□□ 0.27
ERCC3P19447 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.74■□□□□ 0.27
ERCC3P19447 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC3P19447 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC3P19447 AC092135.3-201ENST00000624151 1846 ntBASIC16.74■□□□□ 0.27
ERCC3P19447 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC3P19447 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ERCC3P19447 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ERCC3P19447 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ERCC3P19447 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC3P19447 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC3P19447 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC3P19447 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC3P19447 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC3P19447 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC3P19447 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC3P19447 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC3P19447 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 AC009093.10-201ENST00000641956 1442 ntBASIC16.73■□□□□ 0.27
ERCC3P19447 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 AC140479.7-201ENST00000636301 2332 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms