Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.15□□□□□ -0.3
HMGN1P05114 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.15□□□□□ -0.3
HMGN1P05114 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HMGN1P05114 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
HMGN1P05114 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HMGN1P05114 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.15□□□□□ -0.3
HMGN1P05114 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
HMGN1P05114 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.15□□□□□ -0.3
HMGN1P05114 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.15□□□□□ -0.3
HMGN1P05114 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.15□□□□□ -0.3
HMGN1P05114 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.15□□□□□ -0.3
HMGN1P05114 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.15□□□□□ -0.3
HMGN1P05114 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.15□□□□□ -0.3
HMGN1P05114 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.15□□□□□ -0.3
HMGN1P05114 AC093214.1-201ENST00000511688 1107 ntBASIC13.15□□□□□ -0.3
HMGN1P05114 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.15□□□□□ -0.3
HMGN1P05114 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.15□□□□□ -0.3
HMGN1P05114 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.15□□□□□ -0.3
HMGN1P05114 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.15□□□□□ -0.3
HMGN1P05114 CU634019.7-201ENST00000624153 1185 ntBASIC13.15□□□□□ -0.3
HMGN1P05114 FP236241.2-201ENST00000624906 1185 ntBASIC13.15□□□□□ -0.3
HMGN1P05114 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.15□□□□□ -0.3
HMGN1P05114 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HMGN1P05114 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.15□□□□□ -0.3
HMGN1P05114 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.15□□□□□ -0.3
HMGN1P05114 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HMGN1P05114 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 NCLP1-201ENST00000445357 1963 ntBASIC13.14□□□□□ -0.31
HMGN1P05114 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HMGN1P05114 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
HMGN1P05114 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.14□□□□□ -0.31
HMGN1P05114 AC098850.1-201ENST00000419919 790 ntBASIC13.14□□□□□ -0.31
HMGN1P05114 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.14□□□□□ -0.31
HMGN1P05114 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.14□□□□□ -0.31
HMGN1P05114 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
HMGN1P05114 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.14□□□□□ -0.31
HMGN1P05114 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
HMGN1P05114 BAP1-211ENST00000615113 489 ntBASIC13.14□□□□□ -0.31
HMGN1P05114 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.14□□□□□ -0.31
HMGN1P05114 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 KRT8P28-201ENST00000433288 1390 ntBASIC13.14□□□□□ -0.31
HMGN1P05114 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HMGN1P05114 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HMGN1P05114 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HMGN1P05114 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms