Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 AGGF1P10-201ENST00000635005 2191 ntBASIC12.16□□□□□ -0.46
CD74P04233 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CD74P04233 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.16□□□□□ -0.46
CD74P04233 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CD74P04233 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.16□□□□□ -0.46
CD74P04233 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.16□□□□□ -0.46
CD74P04233 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CD74P04233 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CD74P04233 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 C1QBPP1-201ENST00000400117 770 ntBASIC12.16□□□□□ -0.46
CD74P04233 AC134915.1-201ENST00000426461 574 ntBASIC12.16□□□□□ -0.46
CD74P04233 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.16□□□□□ -0.46
CD74P04233 AC092580.3-201ENST00000430932 139 ntBASIC12.16□□□□□ -0.46
CD74P04233 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.16□□□□□ -0.46
CD74P04233 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.16□□□□□ -0.46
CD74P04233 GNAQP1-201ENST00000444815 1067 ntBASIC12.16□□□□□ -0.46
CD74P04233 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.16□□□□□ -0.46
CD74P04233 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.16□□□□□ -0.46
CD74P04233 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.16□□□□□ -0.46
CD74P04233 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.16□□□□□ -0.46
CD74P04233 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.16□□□□□ -0.46
CD74P04233 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.16□□□□□ -0.46
CD74P04233 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.16□□□□□ -0.46
CD74P04233 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.16□□□□□ -0.46
CD74P04233 AL590560.3-201ENST00000623350 461 ntBASIC12.16□□□□□ -0.46
CD74P04233 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 AC107375.1-201ENST00000564464 2231 ntBASIC12.16□□□□□ -0.46
CD74P04233 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 AC100757.3-201ENST00000622361 1406 ntBASIC12.16□□□□□ -0.46
CD74P04233 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 AC108024.1-201ENST00000626286 1721 ntBASIC12.16□□□□□ -0.46
CD74P04233 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CD74P04233 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD74P04233 PCDHA5-203ENST00000614258 4248 ntBASIC12.16□□□□□ -0.46
CD74P04233 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CD74P04233 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.15□□□□□ -0.46
CD74P04233 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.15□□□□□ -0.46
CD74P04233 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CD74P04233 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.15□□□□□ -0.46
CD74P04233 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.15□□□□□ -0.46
CD74P04233 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CD74P04233 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD74P04233 BX842568.4-201ENST00000421222 227 ntBASIC12.15□□□□□ -0.46
CD74P04233 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.15□□□□□ -0.46
CD74P04233 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.15□□□□□ -0.46
CD74P04233 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CD74P04233 AC125807.1-201ENST00000483097 614 ntBASIC12.15□□□□□ -0.46
CD74P04233 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.15□□□□□ -0.46
CD74P04233 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms