Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL645933.1-201ENST00000440087 609 ntBASIC12.92□□□□□ -0.34
CNOT4O95628 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 MARK2P5-201ENST00000507649 634 ntBASIC12.92□□□□□ -0.34
CNOT4O95628 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.92□□□□□ -0.34
CNOT4O95628 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.92□□□□□ -0.34
CNOT4O95628 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.92□□□□□ -0.34
CNOT4O95628 RBM8B-201ENST00000555532 525 ntBASIC12.92□□□□□ -0.34
CNOT4O95628 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.92□□□□□ -0.34
CNOT4O95628 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.92□□□□□ -0.34
CNOT4O95628 AL132994.2-201ENST00000603120 687 ntBASIC12.92□□□□□ -0.34
CNOT4O95628 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 AC138627.1-207ENST00000641560 1006 ntBASIC12.92□□□□□ -0.34
CNOT4O95628 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.92□□□□□ -0.34
CNOT4O95628 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CNOT4O95628 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.91□□□□□ -0.34
CNOT4O95628 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CNOT4O95628 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.91□□□□□ -0.34
CNOT4O95628 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.91□□□□□ -0.34
CNOT4O95628 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CNOT4O95628 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.91□□□□□ -0.34
CNOT4O95628 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.91□□□□□ -0.34
CNOT4O95628 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.91□□□□□ -0.34
CNOT4O95628 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.91□□□□□ -0.34
CNOT4O95628 AC011742.3-201ENST00000439053 820 ntBASIC12.91□□□□□ -0.34
CNOT4O95628 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.91□□□□□ -0.34
CNOT4O95628 RNMTL1P1-201ENST00000454103 560 ntBASIC12.91□□□□□ -0.34
CNOT4O95628 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.91□□□□□ -0.34
CNOT4O95628 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.91□□□□□ -0.34
CNOT4O95628 HLA-J-204ENST00000495278 958 ntBASIC12.91□□□□□ -0.34
CNOT4O95628 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.91□□□□□ -0.34
CNOT4O95628 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.91□□□□□ -0.34
CNOT4O95628 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.91□□□□□ -0.34
CNOT4O95628 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.91□□□□□ -0.34
CNOT4O95628 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.91□□□□□ -0.34
CNOT4O95628 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.91□□□□□ -0.34
CNOT4O95628 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.91□□□□□ -0.34
CNOT4O95628 MIR3619-201ENST00000579667 83 ntBASIC12.91□□□□□ -0.34
CNOT4O95628 AC090164.2-201ENST00000611487 516 ntBASIC12.91□□□□□ -0.34
CNOT4O95628 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CNOT4O95628 AC133540.1-201ENST00000620845 1019 ntBASIC12.91□□□□□ -0.34
CNOT4O95628 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.91□□□□□ -0.34
CNOT4O95628 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.91□□□□□ -0.34
CNOT4O95628 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.91□□□□□ -0.34
CNOT4O95628 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.91□□□□□ -0.34
CNOT4O95628 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.91□□□□□ -0.34
CNOT4O95628 LINC00552-201ENST00000625151 2579 ntBASIC12.91□□□□□ -0.34
CNOT4O95628 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CNOT4O95628 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms