Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL645933.1-201ENST00000440087 609 ntBASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 MAGEA5-201ENST00000446757 942 ntBASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 EEF1DP6-201ENST00000449232 372 ntBASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AC006122.1-201ENST00000493323 440 ntBASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 IGLV3-15-201ENST00000518356 244 ntBASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 RTN3P1-201ENST00000536295 711 ntBASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 AF254983.2-201ENST00000612331 135 ntBASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPA3F8WFD2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 KRT8P21-201ENST00000430398 1491 ntBASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AC073150.1-201ENST00000450406 1084 ntBASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AC103988.2-201ENST00000561804 725 ntBASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AL353770.1-201ENST00000614915 403 ntBASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 AC133540.1-201ENST00000620845 1019 ntBASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.18□□□□□ -0.3
NPIPA3F8WFD2 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms