Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 AL591846.1-201ENST00000451736 433 ntBASIC12.73□□□□□ -0.37
NPIPB4C9JG80 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 MIR4259-201ENST00000584466 101 ntBASIC12.73□□□□□ -0.37
NPIPB4C9JG80 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 AC004923.1-202ENST00000642106 209 ntBASIC12.73□□□□□ -0.37
NPIPB4C9JG80 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 AL365209.1-201ENST00000624418 6473 ntBASIC12.73□□□□□ -0.37
NPIPB4C9JG80 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 AC009474.1-201ENST00000455096 1565 ntBASIC12.73□□□□□ -0.37
NPIPB4C9JG80 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NPIPB4C9JG80 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 NCLP1-201ENST00000445357 1963 ntBASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 LINC01815-202ENST00000641468 1409 ntBASIC12.72□□□□□ -0.37
NPIPB4C9JG80 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AC106794.1-201ENST00000506935 792 ntBASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AC007663.3-201ENST00000609632 465 ntBASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AC092299.1-201ENST00000632679 757 ntBASIC12.72□□□□□ -0.37
NPIPB4C9JG80 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms