Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 AL021578.1-201ENST00000613646 709 ntBASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 CYP4F23P-201ENST00000593402 1579 ntBASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
COL4A3BPQ9Y5P4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 AC005840.4-201ENST00000541242 2494 ntBASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 ACTG1P2-201ENST00000415776 1125 ntBASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 ACTG1P11-201ENST00000425411 1125 ntBASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 AL161932.2-201ENST00000435436 679 ntBASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 AL606495.2-201ENST00000605867 535 ntBASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 AP001505.2-201ENST00000616815 443 ntBASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 AC133540.1-201ENST00000620845 1019 ntBASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 AC138627.1-207ENST00000641560 1006 ntBASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL4A3BPQ9Y5P4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 AL365209.1-201ENST00000624418 6473 ntBASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 RN7SKP214-201ENST00000364208 315 ntBASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 AL662890.1-201ENST00000396818 632 ntBASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 AC078875.1-201ENST00000431907 724 ntBASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 MIR3619-201ENST00000579667 83 ntBASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL4A3BPQ9Y5P4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms