Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 AL590640.2-201ENST00000457038 527 ntBASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 RNA5SP486-201ENST00000515961 83 ntBASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 AC103988.2-201ENST00000561804 725 ntBASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 BTNL10-201ENST00000595971 695 ntBASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 AL022328.1-201ENST00000610050 478 ntBASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 IGHV3-72-202ENST00000621503 303 ntBASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 AL731571.1-201ENST00000617058 5428 ntBASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 TCAF1P1-201ENST00000414990 2232 ntBASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 FP325330.2-201ENST00000624219 5630 ntBASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 AP000593.2-201ENST00000542775 1433 ntBASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 FAM197Y7-201ENST00000432892 766 ntBASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 FTH1P14-201ENST00000482930 551 ntBASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RHBDD3Q9Y3P4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms