Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRCH1Q9Y2L9 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 LINC00638-201ENST00000555578 2518 ntBASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 AC025678.2-201ENST00000562061 970 ntBASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 AC009955.4-201ENST00000597192 544 ntBASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 AC008267.7-201ENST00000624570 1194 ntBASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 AL645937.6-201ENST00000641122 3727 ntBASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRCH1Q9Y2L9 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 AC004623.1-201ENST00000624592 2127 ntBASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 AC026992.2-203ENST00000563004 2419 ntBASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 SPCS2P4-201ENST00000436160 681 ntBASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 HLA-J-203ENST00000494367 1087 ntBASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 AC004449.1-201ENST00000564240 433 ntBASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms