Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC025183.3-201ENST00000623526 1482 ntBASIC14.26□□□□□ -0.13
MKS1Q9NXB0 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.26□□□□□ -0.13
MKS1Q9NXB0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.26□□□□□ -0.13
MKS1Q9NXB0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 ACTG1P3-201ENST00000431775 1114 ntBASIC14.26□□□□□ -0.13
MKS1Q9NXB0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 MIR4683-201ENST00000579659 81 ntBASIC14.26□□□□□ -0.13
MKS1Q9NXB0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 AL445250.1-201ENST00000641671 2259 ntBASIC14.26□□□□□ -0.13
MKS1Q9NXB0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 AC005562.1-201ENST00000583030 3219 ntBASIC14.26□□□□□ -0.13
MKS1Q9NXB0 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 AC061965.1-201ENST00000560524 1465 ntBASIC14.25□□□□□ -0.13
MKS1Q9NXB0 AC007541.1-201ENST00000570282 1469 ntBASIC14.25□□□□□ -0.13
MKS1Q9NXB0 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 CD8B2-202ENST00000417670 633 ntBASIC14.25□□□□□ -0.13
MKS1Q9NXB0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 ST13P19-201ENST00000442505 1124 ntBASIC14.25□□□□□ -0.13
MKS1Q9NXB0 SERBP1P5-201ENST00000510079 1181 ntBASIC14.25□□□□□ -0.13
MKS1Q9NXB0 API5-211ENST00000534695 560 ntTSL 5 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 MIR5189-201ENST00000577370 114 ntBASIC14.25□□□□□ -0.13
MKS1Q9NXB0 GNRHR2-203ENST00000581100 1187 ntBASIC14.25□□□□□ -0.13
MKS1Q9NXB0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 OR10B1P-201ENST00000601666 907 ntBASIC14.25□□□□□ -0.13
MKS1Q9NXB0 ECM1P1-201ENST00000604092 1279 ntBASIC14.25□□□□□ -0.13
MKS1Q9NXB0 RPSAP52-203ENST00000622976 1023 ntBASIC14.25□□□□□ -0.13
MKS1Q9NXB0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MKS1Q9NXB0 AC007952.5-201ENST00000572818 1486 ntBASIC14.25□□□□□ -0.13
MKS1Q9NXB0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms