Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 DUX4L16-201ENST00000555130 1264 ntBASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 AC069236.1-201ENST00000604339 616 ntBASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 AC008694.1-202ENST00000636953 945 ntBASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 GIMAP6-203ENST00000618759 3910 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF319-201ENST00000299237 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CDC42SE1Q9NRR8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 COL14A1-203ENST00000309791 6163 ntTSL 5 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 AL049757.1-201ENST00000616842 1596 ntBASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 AP000897.1-201ENST00000584036 1613 ntBASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 SIRPB1-204ENST00000381603 1715 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 C4orf50-201ENST00000324058 5201 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 AC245140.2-201ENST00000624054 1939 ntBASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 RHCG-201ENST00000268122 1982 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 AC068473.3-202ENST00000589723 4167 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 SPATA13-205ENST00000409126 2111 ntTSL 2 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 GOLGA6D-201ENST00000434739 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 PIK3R5-218ENST00000611902 4339 ntTSL 5 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 SPATA33-201ENST00000301031 2190 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 ESM1-202ENST00000381405 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 GRB10-210ENST00000407526 2279 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 ST3GAL5-254ENST00000640322 2368 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 DCAF11-202ENST00000396936 2469 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CDC42SE1Q9NRR8 TBCEL-202ENST00000422003 5142 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 PXK-210ENST00000479241 2817 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 LINC01070-201ENST00000561786 2829 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 USP53-201ENST00000274030 5936 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 RNF4-201ENST00000314289 3088 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 TMEM59-201ENST00000234831 6691 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 TLR5-201ENST00000366881 3368 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ESYT1-201ENST00000267113 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 IL10RA-201ENST00000227752 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 MATN1-201ENST00000373765 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ATXN7L3-201ENST00000389384 3811 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ATAD3C-201ENST00000378785 3859 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 BHLHB9-203ENST00000447531 4031 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 KBTBD12-201ENST00000343941 4121 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 MPP2-220ENST00000622681 4242 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ABCC8-202ENST00000389817 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AMBRA1-202ENST00000458649 5351 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ARMC10P1-201ENST00000313754 855 ntBASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 N4BP2L1-204ENST00000380139 2994 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 PISD-203ENST00000397500 2194 ntTSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 DIS3L2-204ENST00000409307 2658 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 THRAP3P1-201ENST00000411753 2786 ntBASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 PEX5L-213ENST00000476138 2361 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ATP2A1-203ENST00000536376 3130 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AMIGO2-203ENST00000550413 2856 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AL160237.2-201ENST00000556165 472 ntBASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC7.14□□□□□ -1.27
CDC42SE1Q9NRR8 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms