Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 IL9RP3-201ENST00000442856 1674 ntBASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 PPP1R2P4-201ENST00000424051 595 ntBASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 DUX4L50-201ENST00000455245 715 ntBASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 AL512310.5-201ENST00000551999 515 ntBASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 RN7SL455P-201ENST00000580629 282 ntBASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 AC011491.1-203ENST00000637688 543 ntBASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
KIAA1549Q9HCM3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 SNX18-202ENST00000343017 3140 ntBASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 MIR645-201ENST00000385283 94 ntBASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 AL512306.1-201ENST00000432698 848 ntBASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 RN7SL8P-201ENST00000461771 266 ntBASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 RPL18AP3-201ENST00000462885 528 ntBASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 LINC00115-201ENST00000473798 1317 ntBASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms