Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 MYADML-201ENST00000474610 2147 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 AGGF1P1-201ENST00000509500 2073 ntBASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 AL121929.2-201ENST00000609691 1432 ntBASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
KRTAP4-3Q9BYR4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 KRT17P5-201ENST00000332088 839 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 Z97985.1-201ENST00000332270 946 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 MBP-201ENST00000354542 575 ntTSL 2 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 BANF1P3-201ENST00000412556 261 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AL807761.2-201ENST00000422849 729 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 PSAT1P2-201ENST00000426107 972 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 RPL13AP19-201ENST00000434320 584 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 ST13P19-201ENST00000442505 1124 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 FTLP1-201ENST00000449155 526 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 TMEM198B-204ENST00000484016 896 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AC022447.6-201ENST00000515522 438 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AC124068.2-201ENST00000569473 1109 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 PHBP15-201ENST00000574228 665 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AC090079.2-201ENST00000575289 768 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 SIGLEC18P-201ENST00000602271 909 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AC067773.1-201ENST00000603284 1094 ntBASIC4.9□□□□□ -1.63
KRTAP4-3Q9BYR4 AC007326.1-201ENST00000604539 458 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms