Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL13Q99616 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CCL13Q99616 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 DPM3-202ENST00000368399 517 ntBASIC12.13□□□□□ -0.47
CCL13Q99616 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL13Q99616 VDAC1P1-201ENST00000439229 848 ntBASIC12.13□□□□□ -0.47
CCL13Q99616 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.13□□□□□ -0.47
CCL13Q99616 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.13□□□□□ -0.47
CCL13Q99616 AP001258.2-201ENST00000529891 490 ntBASIC12.13□□□□□ -0.47
CCL13Q99616 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL13Q99616 AL451050.2-201ENST00000606967 682 ntBASIC12.13□□□□□ -0.47
CCL13Q99616 AC090164.2-201ENST00000611487 516 ntBASIC12.13□□□□□ -0.47
CCL13Q99616 AL136295.7-201ENST00000619226 1200 ntBASIC12.13□□□□□ -0.47
CCL13Q99616 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CCL13Q99616 DMBT1P1-203ENST00000636837 4628 ntBASIC12.13□□□□□ -0.47
CCL13Q99616 HSPA8P5-201ENST00000456928 2069 ntBASIC12.13□□□□□ -0.47
CCL13Q99616 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.13□□□□□ -0.47
CCL13Q99616 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL13Q99616 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CCL13Q99616 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL13Q99616 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CCL13Q99616 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CCL13Q99616 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CCL13Q99616 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CCL13Q99616 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CCL13Q99616 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 AC064801.2-201ENST00000625052 1303 ntBASIC12.12□□□□□ -0.47
CCL13Q99616 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.12□□□□□ -0.47
CCL13Q99616 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CCL13Q99616 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
CCL13Q99616 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
CCL13Q99616 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.12□□□□□ -0.47
CCL13Q99616 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CCL13Q99616 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.12□□□□□ -0.47
CCL13Q99616 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 NKAIN1P1-201ENST00000435754 582 ntBASIC12.12□□□□□ -0.47
CCL13Q99616 AC006033.1-201ENST00000440505 426 ntBASIC12.12□□□□□ -0.47
CCL13Q99616 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 AC004898.1-201ENST00000451057 766 ntBASIC12.12□□□□□ -0.47
CCL13Q99616 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 HLA-J-204ENST00000495278 958 ntBASIC12.12□□□□□ -0.47
CCL13Q99616 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.12□□□□□ -0.47
CCL13Q99616 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.12□□□□□ -0.47
CCL13Q99616 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.12□□□□□ -0.47
CCL13Q99616 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.12□□□□□ -0.47
CCL13Q99616 AC068587.8-201ENST00000641239 219 ntBASIC12.12□□□□□ -0.47
CCL13Q99616 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CCL13Q99616 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.12□□□□□ -0.47
CCL13Q99616 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 AL136379.1-201ENST00000623471 2642 ntBASIC12.12□□□□□ -0.47
CCL13Q99616 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.12□□□□□ -0.47
CCL13Q99616 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
CCL13Q99616 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCL13Q99616 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms