Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 AC089987.1-201ENST00000551654 2209 ntBASIC15.09■□□□□ 0.01
RFX6Q8HWS3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 AL157996.1-201ENST00000624684 2299 ntBASIC15.09■□□□□ 0.01
RFX6Q8HWS3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFX6Q8HWS3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.08■□□□□ 0.01
RFX6Q8HWS3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RFX6Q8HWS3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RFX6Q8HWS3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RFX6Q8HWS3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.08■□□□□ 0.01
RFX6Q8HWS3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.08■□□□□ 0.01
RFX6Q8HWS3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.08■□□□□ 0.01
RFX6Q8HWS3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.08■□□□□ 0.01
RFX6Q8HWS3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
RFX6Q8HWS3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
RFX6Q8HWS3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RFX6Q8HWS3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RFX6Q8HWS3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.08■□□□□ 0
RFX6Q8HWS3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
RFX6Q8HWS3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.08■□□□□ 0
RFX6Q8HWS3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RFX6Q8HWS3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RFX6Q8HWS3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.08■□□□□ 0
RFX6Q8HWS3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.08■□□□□ 0
RFX6Q8HWS3 AP000812.2-201ENST00000538934 718 ntBASIC15.08■□□□□ 0
RFX6Q8HWS3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.08■□□□□ 0
RFX6Q8HWS3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.08■□□□□ 0
RFX6Q8HWS3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.08■□□□□ 0
RFX6Q8HWS3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 AL022313.4-201ENST00000562756 2046 ntBASIC15.08■□□□□ 0
RFX6Q8HWS3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.08■□□□□ 0
RFX6Q8HWS3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RFX6Q8HWS3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RFX6Q8HWS3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 E2F3P2-201ENST00000447755 1422 ntBASIC15.08■□□□□ 0
RFX6Q8HWS3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.08■□□□□ 0
RFX6Q8HWS3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RFX6Q8HWS3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.07■□□□□ 0
RFX6Q8HWS3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.07■□□□□ 0
RFX6Q8HWS3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.07■□□□□ 0
RFX6Q8HWS3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.07■□□□□ 0
RFX6Q8HWS3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.07■□□□□ 0
RFX6Q8HWS3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 AL035633.1-201ENST00000406139 838 ntBASIC15.07■□□□□ 0
RFX6Q8HWS3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.07■□□□□ 0
RFX6Q8HWS3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.07■□□□□ 0
RFX6Q8HWS3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFX6Q8HWS3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.07■□□□□ 0
RFX6Q8HWS3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms