Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 TPM1-223ENST00000560445 485 ntTSL 3 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 AL353726.2-201ENST00000623259 884 ntBASIC19.78■□□□□ 0.76
CDCA8Q53HL2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 OR2I1P-210ENST00000642037 4691 ntBASIC19.78■□□□□ 0.76
CDCA8Q53HL2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 AC007191.1-201ENST00000623179 2995 ntBASIC19.77■□□□□ 0.76
CDCA8Q53HL2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 ALG1L13P-202ENST00000519320 584 ntBASIC19.77■□□□□ 0.76
CDCA8Q53HL2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDCA8Q53HL2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDCA8Q53HL2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDCA8Q53HL2 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 MIR645-201ENST00000385283 94 ntBASIC19.76■□□□□ 0.75
CDCA8Q53HL2 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 AC026316.1-201ENST00000398900 414 ntBASIC19.76■□□□□ 0.75
CDCA8Q53HL2 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 FTH1P22-201ENST00000456305 520 ntBASIC19.76■□□□□ 0.75
CDCA8Q53HL2 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 AC079328.1-201ENST00000560358 952 ntBASIC19.76■□□□□ 0.75
CDCA8Q53HL2 NDUFB10P1-201ENST00000567319 521 ntBASIC19.76■□□□□ 0.75
CDCA8Q53HL2 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC19.76■□□□□ 0.75
CDCA8Q53HL2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.75■□□□□ 0.75
CDCA8Q53HL2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms