Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HSPG2P98160 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HSPG2P98160 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC8.53□□□□□ -1.04
HSPG2P98160 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HSPG2P98160 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HSPG2P98160 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HSPG2P98160 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC8.53□□□□□ -1.04
HSPG2P98160 AC012066.1-201ENST00000439252 694 ntBASIC8.53□□□□□ -1.04
HSPG2P98160 AC079250.1-201ENST00000456046 531 ntBASIC8.53□□□□□ -1.04
HSPG2P98160 AC090825.2-201ENST00000557959 739 ntBASIC8.53□□□□□ -1.04
HSPG2P98160 DNM1P50-201ENST00000565767 508 ntBASIC8.53□□□□□ -1.04
HSPG2P98160 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC8.53□□□□□ -1.04
HSPG2P98160 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
HSPG2P98160 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
HSPG2P98160 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
HSPG2P98160 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
HSPG2P98160 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC8.53□□□□□ -1.04
HSPG2P98160 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HSPG2P98160 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC8.52□□□□□ -1.04
HSPG2P98160 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC8.52□□□□□ -1.04
HSPG2P98160 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC8.52□□□□□ -1.04
HSPG2P98160 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC8.52□□□□□ -1.04
HSPG2P98160 CD81-209ENST00000492627 886 ntTSL 3 BASIC8.52□□□□□ -1.04
HSPG2P98160 RN7SL638P-201ENST00000494527 290 ntBASIC8.52□□□□□ -1.04
HSPG2P98160 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
HSPG2P98160 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC8.52□□□□□ -1.04
HSPG2P98160 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
HSPG2P98160 AC091736.1-201ENST00000609370 305 ntBASIC8.52□□□□□ -1.04
HSPG2P98160 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
HSPG2P98160 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.04
HSPG2P98160 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
HSPG2P98160 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC8.52□□□□□ -1.05
HSPG2P98160 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
HSPG2P98160 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 CLK2P1-201ENST00000416636 1294 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC8.52□□□□□ -1.05
HSPG2P98160 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC8.52□□□□□ -1.05
HSPG2P98160 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC8.52□□□□□ -1.05
HSPG2P98160 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC8.52□□□□□ -1.05
HSPG2P98160 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC8.52□□□□□ -1.05
HSPG2P98160 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC8.52□□□□□ -1.05
HSPG2P98160 AC116036.2-201ENST00000607592 462 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
HSPG2P98160 AC011498.7-201ENST00000624986 2027 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 AC215219.1-201ENST00000400706 1817 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 AL365203.3-201ENST00000609742 2057 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC8.52□□□□□ -1.05
HSPG2P98160 PRORSD1P-202ENST00000563365 2154 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 BANP-204ENST00000393208 2283 ntTSL 2 BASIC8.52□□□□□ -1.05
HSPG2P98160 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC8.52□□□□□ -1.05
HSPG2P98160 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 AC096713.1-201ENST00000514650 978 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 AL353708.1-201ENST00000567904 1257 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 AC136475.9-201ENST00000605240 497 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 AC245369.8-201ENST00000636589 306 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC8.52□□□□□ -1.05
HSPG2P98160 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC8.52□□□□□ -1.05
HSPG2P98160 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
HSPG2P98160 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
HSPG2P98160 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC8.52□□□□□ -1.05
HSPG2P98160 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
HSPG2P98160 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 MIR1307-201ENST00000408840 149 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC8.52□□□□□ -1.05
HSPG2P98160 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC8.52□□□□□ -1.05
HSPG2P98160 RAB42P1-201ENST00000555078 316 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 AL356740.1-201ENST00000602192 1297 ntBASIC8.52□□□□□ -1.05
HSPG2P98160 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
HSPG2P98160 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC8.52□□□□□ -1.05
HSPG2P98160 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HSPG2P98160 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HSPG2P98160 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HSPG2P98160 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HSPG2P98160 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HSPG2P98160 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HSPG2P98160 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms