Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
CKS1BP61024 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC10.26□□□□□ -0.77
CKS1BP61024 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
CKS1BP61024 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.25□□□□□ -0.77
CKS1BP61024 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 AC113367.3-201ENST00000508316 1912 ntBASIC10.25□□□□□ -0.77
CKS1BP61024 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC10.25□□□□□ -0.77
CKS1BP61024 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC10.25□□□□□ -0.77
CKS1BP61024 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 KLK8-202ENST00000320838 456 ntTSL 5 BASIC10.25□□□□□ -0.77
CKS1BP61024 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
CKS1BP61024 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.25□□□□□ -0.77
CKS1BP61024 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
CKS1BP61024 TARDBPP1-201ENST00000442013 1203 ntBASIC10.25□□□□□ -0.77
CKS1BP61024 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 AC069335.1-201ENST00000489972 472 ntBASIC10.25□□□□□ -0.77
CKS1BP61024 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
CKS1BP61024 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC10.25□□□□□ -0.77
CKS1BP61024 AC015910.1-201ENST00000579400 975 ntBASIC10.25□□□□□ -0.77
CKS1BP61024 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.25□□□□□ -0.77
CKS1BP61024 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.25□□□□□ -0.77
CKS1BP61024 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.25□□□□□ -0.77
CKS1BP61024 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
CKS1BP61024 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 AC018529.2-202ENST00000611482 3087 ntBASIC10.25□□□□□ -0.77
CKS1BP61024 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.25□□□□□ -0.77
CKS1BP61024 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
CKS1BP61024 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
CKS1BP61024 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
CKS1BP61024 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.25□□□□□ -0.77
CKS1BP61024 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC10.25□□□□□ -0.77
CKS1BP61024 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
CKS1BP61024 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
CKS1BP61024 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC10.25□□□□□ -0.77
CKS1BP61024 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.25□□□□□ -0.77
CKS1BP61024 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CKS1BP61024 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
CKS1BP61024 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
CKS1BP61024 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
CKS1BP61024 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
CKS1BP61024 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CKS1BP61024 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
CKS1BP61024 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms