Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.46□□□□□ -0.41
AP3S2P59780 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.46□□□□□ -0.41
AP3S2P59780 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
AP3S2P59780 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.46□□□□□ -0.41
AP3S2P59780 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.46□□□□□ -0.41
AP3S2P59780 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.46□□□□□ -0.41
AP3S2P59780 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
AP3S2P59780 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
AP3S2P59780 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.46□□□□□ -0.41
AP3S2P59780 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
AP3S2P59780 AC131206.1-201ENST00000538078 1211 ntBASIC12.46□□□□□ -0.41
AP3S2P59780 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.46□□□□□ -0.41
AP3S2P59780 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.46□□□□□ -0.41
AP3S2P59780 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.46□□□□□ -0.41
AP3S2P59780 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.46□□□□□ -0.41
AP3S2P59780 AC092865.6-201ENST00000642101 219 ntBASIC12.46□□□□□ -0.41
AP3S2P59780 ABCD1P2-201ENST00000429313 1601 ntBASIC12.46□□□□□ -0.41
AP3S2P59780 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.46□□□□□ -0.42
AP3S2P59780 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.46□□□□□ -0.42
AP3S2P59780 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.42
AP3S2P59780 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S2P59780 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
AP3S2P59780 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S2P59780 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S2P59780 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP3S2P59780 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.46□□□□□ -0.42
AP3S2P59780 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.46□□□□□ -0.42
AP3S2P59780 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.45□□□□□ -0.42
AP3S2P59780 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.45□□□□□ -0.42
AP3S2P59780 AC064801.2-201ENST00000625052 1303 ntBASIC12.45□□□□□ -0.42
AP3S2P59780 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
AP3S2P59780 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 AC139712.1-201ENST00000378256 1875 ntBASIC12.45□□□□□ -0.42
AP3S2P59780 AC008620.2-201ENST00000510294 1569 ntBASIC12.45□□□□□ -0.42
AP3S2P59780 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.45□□□□□ -0.42
AP3S2P59780 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.45□□□□□ -0.42
AP3S2P59780 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.45□□□□□ -0.42
AP3S2P59780 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.45□□□□□ -0.42
AP3S2P59780 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
AP3S2P59780 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.45□□□□□ -0.42
AP3S2P59780 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
AP3S2P59780 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.45□□□□□ -0.42
AP3S2P59780 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.45□□□□□ -0.42
AP3S2P59780 AC022616.1-201ENST00000518688 554 ntBASIC12.45□□□□□ -0.42
AP3S2P59780 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.45□□□□□ -0.42
AP3S2P59780 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
AP3S2P59780 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.45□□□□□ -0.42
AP3S2P59780 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.45□□□□□ -0.42
AP3S2P59780 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.45□□□□□ -0.42
AP3S2P59780 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.45□□□□□ -0.42
AP3S2P59780 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
AP3S2P59780 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.45□□□□□ -0.42
AP3S2P59780 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.45□□□□□ -0.42
AP3S2P59780 AL138799.1-201ENST00000448213 1675 ntBASIC12.45□□□□□ -0.42
AP3S2P59780 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 CICP1-201ENST00000416803 2410 ntBASIC12.45□□□□□ -0.42
AP3S2P59780 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP3S2P59780 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP3S2P59780 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
AP3S2P59780 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.44□□□□□ -0.42
AP3S2P59780 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
AP3S2P59780 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.44□□□□□ -0.42
AP3S2P59780 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms