Protein–RNA interactions for Protein: P56915

GSC, Homeobox protein goosecoid, humanhuman

Predicted RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSCP56915 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
GSCP56915 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.28■□□□□ 0.04
GSCP56915 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GSCP56915 KLF2P1-201ENST00000447438 1042 ntBASIC15.28■□□□□ 0.04
GSCP56915 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.28■□□□□ 0.04
GSCP56915 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.28■□□□□ 0.04
GSCP56915 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GSCP56915 MIR4259-201ENST00000584466 101 ntBASIC15.28■□□□□ 0.04
GSCP56915 AC017083.2-201ENST00000608069 979 ntBASIC15.28■□□□□ 0.04
GSCP56915 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.28■□□□□ 0.04
GSCP56915 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.28■□□□□ 0.04
GSCP56915 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC15.28■□□□□ 0.04
GSCP56915 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GSCP56915 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GSCP56915 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GSCP56915 AL022313.4-201ENST00000562756 2046 ntBASIC15.27■□□□□ 0.04
GSCP56915 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
GSCP56915 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
GSCP56915 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GSCP56915 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GSCP56915 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSCP56915 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.27■□□□□ 0.04
GSCP56915 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
GSCP56915 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
GSCP56915 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.27■□□□□ 0.04
GSCP56915 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
GSCP56915 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSCP56915 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSCP56915 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GSCP56915 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GSCP56915 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GSCP56915 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSCP56915 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
GSCP56915 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GSCP56915 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.27■□□□□ 0.04
GSCP56915 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.27■□□□□ 0.04
GSCP56915 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.27■□□□□ 0.04
GSCP56915 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.27■□□□□ 0.04
GSCP56915 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.27■□□□□ 0.04
GSCP56915 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.27■□□□□ 0.04
GSCP56915 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.27■□□□□ 0.04
GSCP56915 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.27■□□□□ 0.04
GSCP56915 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GSCP56915 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.27■□□□□ 0.04
GSCP56915 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.27■□□□□ 0.04
GSCP56915 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.27■□□□□ 0.04
GSCP56915 MIR4741-201ENST00000579822 90 ntBASIC15.27■□□□□ 0.04
GSCP56915 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.27■□□□□ 0.04
GSCP56915 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.27■□□□□ 0.04
GSCP56915 AC009884.2-201ENST00000603110 324 ntBASIC15.27■□□□□ 0.04
GSCP56915 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSCP56915 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSCP56915 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
GSCP56915 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.27■□□□□ 0.03
GSCP56915 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSCP56915 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSCP56915 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSCP56915 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSCP56915 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSCP56915 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSCP56915 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSCP56915 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GSCP56915 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GSCP56915 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GSCP56915 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
GSCP56915 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GSCP56915 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GSCP56915 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GSCP56915 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GSCP56915 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GSCP56915 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GSCP56915 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GSCP56915 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.26■□□□□ 0.03
GSCP56915 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.26■□□□□ 0.03
GSCP56915 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GSCP56915 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GSCP56915 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.26■□□□□ 0.03
GSCP56915 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.26■□□□□ 0.03
GSCP56915 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GSCP56915 AC006122.1-201ENST00000493323 440 ntBASIC15.26■□□□□ 0.03
GSCP56915 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GSCP56915 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.26■□□□□ 0.03
GSCP56915 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.26■□□□□ 0.03
GSCP56915 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GSCP56915 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms