Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AL133499.1-201ENST00000596207 608 ntBASIC14.9□□□□□ -0.02
ATXN3P54252 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.9□□□□□ -0.02
ATXN3P54252 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.9□□□□□ -0.02
ATXN3P54252 RN7SL725P-201ENST00000606439 259 ntBASIC14.9□□□□□ -0.02
ATXN3P54252 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.9□□□□□ -0.02
ATXN3P54252 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.9□□□□□ -0.02
ATXN3P54252 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 AC018529.2-202ENST00000611482 3087 ntBASIC14.9□□□□□ -0.02
ATXN3P54252 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATXN3P54252 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ATXN3P54252 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.89□□□□□ -0.03
ATXN3P54252 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.89□□□□□ -0.03
ATXN3P54252 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ATXN3P54252 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.89□□□□□ -0.03
ATXN3P54252 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.89□□□□□ -0.03
ATXN3P54252 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.89□□□□□ -0.03
ATXN3P54252 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ATXN3P54252 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ATXN3P54252 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.89□□□□□ -0.03
ATXN3P54252 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.89□□□□□ -0.03
ATXN3P54252 CHMP1AP1-201ENST00000445563 662 ntBASIC14.89□□□□□ -0.03
ATXN3P54252 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.89□□□□□ -0.03
ATXN3P54252 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.89□□□□□ -0.03
ATXN3P54252 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.89□□□□□ -0.03
ATXN3P54252 AC090857.1-201ENST00000527400 390 ntBASIC14.89□□□□□ -0.03
ATXN3P54252 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
ATXN3P54252 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.89□□□□□ -0.03
ATXN3P54252 AC106820.3-201ENST00000561653 397 ntBASIC14.89□□□□□ -0.03
ATXN3P54252 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.89□□□□□ -0.03
ATXN3P54252 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.89□□□□□ -0.03
ATXN3P54252 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.89□□□□□ -0.03
ATXN3P54252 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.89□□□□□ -0.03
ATXN3P54252 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
ATXN3P54252 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.89□□□□□ -0.03
ATXN3P54252 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.89□□□□□ -0.03
ATXN3P54252 AC092978.1-202ENST00000637590 1327 ntBASIC14.89□□□□□ -0.03
ATXN3P54252 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.89□□□□□ -0.03
ATXN3P54252 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATXN3P54252 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.88□□□□□ -0.03
ATXN3P54252 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
ATXN3P54252 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 AP001267.2-201ENST00000532619 2086 ntBASIC14.88□□□□□ -0.03
ATXN3P54252 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.88□□□□□ -0.03
ATXN3P54252 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ATXN3P54252 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.88□□□□□ -0.03
ATXN3P54252 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.88□□□□□ -0.03
ATXN3P54252 EIF3FP3-201ENST00000434851 1086 ntBASIC14.88□□□□□ -0.03
ATXN3P54252 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.88□□□□□ -0.03
ATXN3P54252 AL353637.1-201ENST00000451571 732 ntBASIC14.88□□□□□ -0.03
ATXN3P54252 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATXN3P54252 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.88□□□□□ -0.03
ATXN3P54252 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms