Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 MIR326-201ENST00000362220 95 ntBASIC13.32□□□□□ -0.28
SHC1P29353 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.32□□□□□ -0.28
SHC1P29353 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SHC1P29353 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 GOLGA2P4-201ENST00000441462 777 ntBASIC13.32□□□□□ -0.28
SHC1P29353 PUDPP3-201ENST00000445368 636 ntBASIC13.32□□□□□ -0.28
SHC1P29353 RPSAP36-202ENST00000494591 1261 ntBASIC13.32□□□□□ -0.28
SHC1P29353 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
SHC1P29353 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.32□□□□□ -0.28
SHC1P29353 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.32□□□□□ -0.28
SHC1P29353 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.32□□□□□ -0.28
SHC1P29353 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.32□□□□□ -0.28
SHC1P29353 MIR6752-201ENST00000618442 71 ntBASIC13.32□□□□□ -0.28
SHC1P29353 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.32□□□□□ -0.28
SHC1P29353 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SHC1P29353 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
SHC1P29353 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SHC1P29353 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 PPT1-213ENST00000641319 2388 ntBASIC13.32□□□□□ -0.28
SHC1P29353 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.32□□□□□ -0.28
SHC1P29353 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.32□□□□□ -0.28
SHC1P29353 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.32□□□□□ -0.28
SHC1P29353 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.32□□□□□ -0.28
SHC1P29353 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.32□□□□□ -0.28
SHC1P29353 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SHC1P29353 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHC1P29353 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
SHC1P29353 AL122018.1-201ENST00000446607 2310 ntBASIC13.31□□□□□ -0.28
SHC1P29353 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
SHC1P29353 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.31□□□□□ -0.28
SHC1P29353 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.31□□□□□ -0.28
SHC1P29353 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.31□□□□□ -0.28
SHC1P29353 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SHC1P29353 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SHC1P29353 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SHC1P29353 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.31□□□□□ -0.28
SHC1P29353 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SHC1P29353 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.31□□□□□ -0.28
SHC1P29353 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.31□□□□□ -0.28
SHC1P29353 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.31□□□□□ -0.28
SHC1P29353 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.31□□□□□ -0.28
SHC1P29353 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.31□□□□□ -0.28
SHC1P29353 ALG3P1-201ENST00000508806 1114 ntBASIC13.31□□□□□ -0.28
SHC1P29353 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SHC1P29353 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.31□□□□□ -0.28
SHC1P29353 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.31□□□□□ -0.28
SHC1P29353 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.31□□□□□ -0.28
SHC1P29353 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SHC1P29353 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.31□□□□□ -0.28
SHC1P29353 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SHC1P29353 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.31□□□□□ -0.28
SHC1P29353 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.31□□□□□ -0.28
SHC1P29353 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHC1P29353 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHC1P29353 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.3□□□□□ -0.28
SHC1P29353 SHC1P1-201ENST00000425230 1745 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms