Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.71□□□□□ -0.22
LAMA1P25391 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LAMA1P25391 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LAMA1P25391 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LAMA1P25391 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.71□□□□□ -0.22
LAMA1P25391 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.71□□□□□ -0.22
LAMA1P25391 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LAMA1P25391 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LAMA1P25391 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LAMA1P25391 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 AL157823.1-201ENST00000403727 628 ntBASIC13.7□□□□□ -0.22
LAMA1P25391 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC13.7□□□□□ -0.22
LAMA1P25391 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC13.7□□□□□ -0.22
LAMA1P25391 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.7□□□□□ -0.22
LAMA1P25391 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC13.7□□□□□ -0.22
LAMA1P25391 AC004466.2-201ENST00000614749 516 ntBASIC13.7□□□□□ -0.22
LAMA1P25391 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.7□□□□□ -0.22
LAMA1P25391 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.7□□□□□ -0.22
LAMA1P25391 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 AC092115.1-201ENST00000566277 1402 ntBASIC13.7□□□□□ -0.22
LAMA1P25391 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
LAMA1P25391 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.7□□□□□ -0.22
LAMA1P25391 RPL18AP16-201ENST00000424057 531 ntBASIC13.7□□□□□ -0.22
LAMA1P25391 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC13.7□□□□□ -0.22
LAMA1P25391 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.7□□□□□ -0.22
LAMA1P25391 LY6E-215ENST00000523847 427 ntTSL 3 BASIC13.7□□□□□ -0.22
LAMA1P25391 AC091304.3-201ENST00000566500 716 ntBASIC13.7□□□□□ -0.22
LAMA1P25391 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.7□□□□□ -0.22
LAMA1P25391 AL021707.6-201ENST00000609212 491 ntBASIC13.7□□□□□ -0.22
LAMA1P25391 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LAMA1P25391 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.7□□□□□ -0.22
LAMA1P25391 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
LAMA1P25391 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.7□□□□□ -0.22
LAMA1P25391 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.7□□□□□ -0.22
LAMA1P25391 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.7□□□□□ -0.22
LAMA1P25391 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LAMA1P25391 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC13.7□□□□□ -0.22
LAMA1P25391 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.7□□□□□ -0.22
LAMA1P25391 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LAMA1P25391 AC079414.2-201ENST00000567157 1104 ntBASIC13.7□□□□□ -0.22
LAMA1P25391 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.7□□□□□ -0.22
LAMA1P25391 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC13.7□□□□□ -0.22
LAMA1P25391 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LAMA1P25391 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.69□□□□□ -0.22
LAMA1P25391 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LAMA1P25391 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LAMA1P25391 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LAMA1P25391 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LAMA1P25391 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.69□□□□□ -0.22
LAMA1P25391 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LAMA1P25391 HLA-DMA-202ENST00000395303 1007 ntBASIC13.69□□□□□ -0.22
LAMA1P25391 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LAMA1P25391 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.69□□□□□ -0.22
LAMA1P25391 FAM21EP-201ENST00000417804 985 ntBASIC13.69□□□□□ -0.22
LAMA1P25391 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.69□□□□□ -0.22
LAMA1P25391 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LAMA1P25391 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LAMA1P25391 AC005865.2-202ENST00000635814 725 ntBASIC13.69□□□□□ -0.22
LAMA1P25391 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LAMA1P25391 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LAMA1P25391 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LAMA1P25391 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.69□□□□□ -0.22
LAMA1P25391 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LAMA1P25391 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LAMA1P25391 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LAMA1P25391 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 AC098657.1-201ENST00000416270 1135 ntBASIC13.69□□□□□ -0.22
LAMA1P25391 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.69□□□□□ -0.22
LAMA1P25391 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.69□□□□□ -0.22
LAMA1P25391 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LAMA1P25391 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LAMA1P25391 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LAMA1P25391 ZNF436-AS1-201ENST00000335648 2547 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms