Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
CCL1P22362 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL1P22362 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL1P22362 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CCL1P22362 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CCL1P22362 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL1P22362 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
CCL1P22362 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL1P22362 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CCL1P22362 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 HMGA1P1-201ENST00000415560 1062 ntBASIC12.41□□□□□ -0.42
CCL1P22362 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL1P22362 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 HMGN1P19-201ENST00000436976 333 ntBASIC12.41□□□□□ -0.42
CCL1P22362 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 AC012441.2-201ENST00000444843 739 ntBASIC12.41□□□□□ -0.42
CCL1P22362 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.41□□□□□ -0.42
CCL1P22362 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.41□□□□□ -0.42
CCL1P22362 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.41□□□□□ -0.42
CCL1P22362 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.41□□□□□ -0.42
CCL1P22362 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.41□□□□□ -0.42
CCL1P22362 AC023310.1-201ENST00000554836 735 ntBASIC12.41□□□□□ -0.42
CCL1P22362 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL1P22362 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.41□□□□□ -0.42
CCL1P22362 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 AL591471.1-201ENST00000621855 229 ntBASIC12.41□□□□□ -0.42
CCL1P22362 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CCL1P22362 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL1P22362 AC008687.7-202ENST00000637404 953 ntBASIC12.41□□□□□ -0.42
CCL1P22362 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL1P22362 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CCL1P22362 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL1P22362 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL1P22362 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CCL1P22362 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL1P22362 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CCL1P22362 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL1P22362 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 ABCD1P2-201ENST00000429313 1601 ntBASIC12.4□□□□□ -0.42
CCL1P22362 AL359845.1-201ENST00000458202 1648 ntBASIC12.4□□□□□ -0.42
CCL1P22362 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL1P22362 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL1P22362 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 AL023775.1-201ENST00000454907 1746 ntBASIC12.4□□□□□ -0.42
CCL1P22362 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.4□□□□□ -0.42
CCL1P22362 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
CCL1P22362 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.4□□□□□ -0.42
CCL1P22362 BOLA2P3-201ENST00000404566 256 ntBASIC12.4□□□□□ -0.42
CCL1P22362 AC079178.1-201ENST00000420915 656 ntBASIC12.4□□□□□ -0.42
CCL1P22362 NME2P1-201ENST00000426182 414 ntBASIC12.4□□□□□ -0.42
CCL1P22362 KLF2P1-201ENST00000447438 1042 ntBASIC12.4□□□□□ -0.42
CCL1P22362 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.4□□□□□ -0.42
CCL1P22362 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms