Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PTPN1P18031 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PTPN1P18031 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN1P18031 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.27■□□□□ 0.03
PTPN1P18031 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN1P18031 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.27■□□□□ 0.03
PTPN1P18031 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN1P18031 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN1P18031 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN1P18031 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN1P18031 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN1P18031 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN1P18031 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.27■□□□□ 0.03
PTPN1P18031 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN1P18031 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PTPN1P18031 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN1P18031 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PTPN1P18031 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN1P18031 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PTPN1P18031 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN1P18031 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.26■□□□□ 0.03
PTPN1P18031 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PTPN1P18031 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PTPN1P18031 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN1P18031 ELK2AP-201ENST00000392510 1007 ntBASIC15.26■□□□□ 0.03
PTPN1P18031 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN1P18031 RN7SL720P-201ENST00000488178 304 ntBASIC15.26■□□□□ 0.03
PTPN1P18031 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN1P18031 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN1P18031 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN1P18031 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN1P18031 AL353770.1-201ENST00000614915 403 ntBASIC15.26■□□□□ 0.03
PTPN1P18031 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN1P18031 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN1P18031 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PTPN1P18031 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN1P18031 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN1P18031 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 AL022313.4-201ENST00000562756 2046 ntBASIC15.26■□□□□ 0.03
PTPN1P18031 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN1P18031 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PTPN1P18031 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN1P18031 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN1P18031 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PTPN1P18031 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PTPN1P18031 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PTPN1P18031 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PTPN1P18031 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN1P18031 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN1P18031 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN1P18031 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PTPN1P18031 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 DUX4L50-201ENST00000455245 715 ntBASIC15.25■□□□□ 0.03
PTPN1P18031 RN7SL277P-201ENST00000481521 288 ntBASIC15.25■□□□□ 0.03
PTPN1P18031 IMP3P2-201ENST00000489760 475 ntBASIC15.25■□□□□ 0.03
PTPN1P18031 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN1P18031 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.25■□□□□ 0.03
PTPN1P18031 RTN3P1-201ENST00000536295 711 ntBASIC15.25■□□□□ 0.03
PTPN1P18031 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PTPN1P18031 AC093752.3-201ENST00000567343 901 ntBASIC15.25■□□□□ 0.03
PTPN1P18031 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN1P18031 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN1P18031 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms