Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC24.33■■□□□ 1.49
TOP2AP11388 CSTP2-201ENST00000610599 398 ntBASIC24.33■■□□□ 1.49
TOP2AP11388 AC123912.6-201ENST00000612657 315 ntBASIC24.33■■□□□ 1.49
TOP2AP11388 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC24.33■■□□□ 1.49
TOP2AP11388 AC048382.6-201ENST00000621980 1223 ntBASIC24.33■■□□□ 1.49
TOP2AP11388 AC245369.7-201ENST00000631386 350 ntBASIC24.33■■□□□ 1.49
TOP2AP11388 MEP1AP1-201ENST00000636082 1097 ntBASIC24.33■■□□□ 1.49
TOP2AP11388 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TOP2AP11388 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
TOP2AP11388 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TOP2AP11388 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC24.33■■□□□ 1.49
TOP2AP11388 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
TOP2AP11388 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.48
TOP2AP11388 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
TOP2AP11388 GUCY2EP-203ENST00000531117 1918 ntBASIC24.33■■□□□ 1.48
TOP2AP11388 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TOP2AP11388 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TOP2AP11388 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TOP2AP11388 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TOP2AP11388 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TOP2AP11388 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
TOP2AP11388 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
TOP2AP11388 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TOP2AP11388 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TOP2AP11388 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TOP2AP11388 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC24.32■■□□□ 1.48
TOP2AP11388 AC005077.3-201ENST00000449614 213 ntBASIC24.32■■□□□ 1.48
TOP2AP11388 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC24.32■■□□□ 1.48
TOP2AP11388 ACY3-202ENST00000529256 933 ntTSL 3 BASIC24.32■■□□□ 1.48
TOP2AP11388 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC24.32■■□□□ 1.48
TOP2AP11388 RN7SL605P-201ENST00000577229 281 ntBASIC24.32■■□□□ 1.48
TOP2AP11388 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC24.32■■□□□ 1.48
TOP2AP11388 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TOP2AP11388 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC24.32■■□□□ 1.48
TOP2AP11388 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC24.32■■□□□ 1.48
TOP2AP11388 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC24.31■■□□□ 1.48
TOP2AP11388 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TOP2AP11388 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TOP2AP11388 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TOP2AP11388 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
TOP2AP11388 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
TOP2AP11388 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC24.31■■□□□ 1.48
TOP2AP11388 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TOP2AP11388 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
TOP2AP11388 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC24.31■■□□□ 1.48
TOP2AP11388 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC24.31■■□□□ 1.48
TOP2AP11388 BCL2L12P1-201ENST00000508390 733 ntBASIC24.31■■□□□ 1.48
TOP2AP11388 AC004923.3-201ENST00000527532 355 ntBASIC24.31■■□□□ 1.48
TOP2AP11388 METTL7AP1-201ENST00000547343 496 ntBASIC24.31■■□□□ 1.48
TOP2AP11388 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC24.31■■□□□ 1.48
TOP2AP11388 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC24.31■■□□□ 1.48
TOP2AP11388 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC24.31■■□□□ 1.48
TOP2AP11388 CCND3P2-201ENST00000579393 537 ntBASIC24.31■■□□□ 1.48
TOP2AP11388 RN7SL121P-201ENST00000584223 273 ntBASIC24.31■■□□□ 1.48
TOP2AP11388 AC016582.2-202ENST00000587765 1094 ntBASIC24.31■■□□□ 1.48
TOP2AP11388 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
TOP2AP11388 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TOP2AP11388 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TOP2AP11388 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TOP2AP11388 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TOP2AP11388 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
TOP2AP11388 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TOP2AP11388 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
TOP2AP11388 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TOP2AP11388 BCL2-203ENST00000589955 5011 ntBASIC24.31■■□□□ 1.48
TOP2AP11388 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 AIG1-203ENST00000367596 559 ntTSL 2 BASIC24.3■■□□□ 1.48
TOP2AP11388 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC24.3■■□□□ 1.48
TOP2AP11388 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC24.3■■□□□ 1.48
TOP2AP11388 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 TREX1-203ENST00000456089 629 ntTSL 3 BASIC24.3■■□□□ 1.48
TOP2AP11388 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC24.3■■□□□ 1.48
TOP2AP11388 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC24.3■■□□□ 1.48
TOP2AP11388 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC24.3■■□□□ 1.48
TOP2AP11388 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC24.3■■□□□ 1.48
TOP2AP11388 AC005746.3-201ENST00000614751 393 ntBASIC24.3■■□□□ 1.48
TOP2AP11388 AL513477.1-201ENST00000602865 2407 ntBASIC24.3■■□□□ 1.48
TOP2AP11388 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC24.3■■□□□ 1.48
TOP2AP11388 STK16-202ENST00000409260 1493 ntTSL 5 BASIC24.3■■□□□ 1.48
TOP2AP11388 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC24.3■■□□□ 1.48
TOP2AP11388 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC24.3■■□□□ 1.48
TOP2AP11388 AL137244.1-201ENST00000422931 865 ntBASIC24.3■■□□□ 1.48
TOP2AP11388 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC24.3■■□□□ 1.48
TOP2AP11388 RPSAP70-201ENST00000504462 864 ntBASIC24.3■■□□□ 1.48
TOP2AP11388 GPX3-202ENST00000517973 612 ntTSL 3 BASIC24.3■■□□□ 1.48
TOP2AP11388 OR4A49P-201ENST00000527050 632 ntBASIC24.3■■□□□ 1.48
TOP2AP11388 MIR3940-201ENST00000579148 102 ntBASIC24.3■■□□□ 1.48
TOP2AP11388 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TOP2AP11388 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms