Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FAM228BP0C875 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.42■□□□□ 0.06
FAM228BP0C875 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FAM228BP0C875 AL008718.2-201ENST00000609206 1313 ntBASIC15.42■□□□□ 0.06
FAM228BP0C875 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.42■□□□□ 0.06
FAM228BP0C875 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.41■□□□□ 0.06
FAM228BP0C875 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 AC135782.3-201ENST00000562782 2105 ntBASIC15.41■□□□□ 0.06
FAM228BP0C875 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
FAM228BP0C875 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.41■□□□□ 0.06
FAM228BP0C875 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 AC004241.5-201ENST00000623870 2448 ntBASIC15.41■□□□□ 0.06
FAM228BP0C875 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
FAM228BP0C875 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 AL512384.1-201ENST00000406683 331 ntBASIC15.41■□□□□ 0.06
FAM228BP0C875 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.41■□□□□ 0.06
FAM228BP0C875 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
FAM228BP0C875 RN7SL692P-201ENST00000464677 288 ntBASIC15.41■□□□□ 0.06
FAM228BP0C875 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.41■□□□□ 0.06
FAM228BP0C875 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.41■□□□□ 0.06
FAM228BP0C875 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.41■□□□□ 0.06
FAM228BP0C875 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.41■□□□□ 0.06
FAM228BP0C875 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.41■□□□□ 0.06
FAM228BP0C875 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
FAM228BP0C875 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 E2F3P2-201ENST00000447755 1422 ntBASIC15.41■□□□□ 0.06
FAM228BP0C875 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.41■□□□□ 0.06
FAM228BP0C875 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM228BP0C875 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM228BP0C875 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FAM228BP0C875 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FAM228BP0C875 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.4■□□□□ 0.06
FAM228BP0C875 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.4■□□□□ 0.06
FAM228BP0C875 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FAM228BP0C875 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
FAM228BP0C875 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
FAM228BP0C875 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.4■□□□□ 0.06
FAM228BP0C875 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.4■□□□□ 0.06
FAM228BP0C875 AL157407.1-201ENST00000435784 904 ntBASIC15.4■□□□□ 0.06
FAM228BP0C875 ST13P19-201ENST00000442505 1124 ntBASIC15.4■□□□□ 0.06
FAM228BP0C875 AL355994.2-201ENST00000447882 704 ntBASIC15.4■□□□□ 0.06
FAM228BP0C875 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.4■□□□□ 0.06
FAM228BP0C875 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
FAM228BP0C875 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
FAM228BP0C875 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
FAM228BP0C875 AC132192.2-201ENST00000596206 1147 ntBASIC15.4■□□□□ 0.06
FAM228BP0C875 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.4■□□□□ 0.06
FAM228BP0C875 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.4■□□□□ 0.06
FAM228BP0C875 IGHV3-72-202ENST00000621503 303 ntBASIC15.4■□□□□ 0.06
FAM228BP0C875 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
FAM228BP0C875 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
FAM228BP0C875 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.4■□□□□ 0.06
FAM228BP0C875 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.4■□□□□ 0.06
FAM228BP0C875 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.4■□□□□ 0.06
FAM228BP0C875 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM228BP0C875 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.4■□□□□ 0.06
FAM228BP0C875 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms