Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 AC002472.3-201ENST00000640124 621 ntBASIC13.28□□□□□ -0.28
HIST1H2ABP04908 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 AL805961.2-201ENST00000642139 4817 ntBASIC13.28□□□□□ -0.28
HIST1H2ABP04908 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 AC020910.6-201ENST00000623084 1459 ntBASIC13.28□□□□□ -0.28
HIST1H2ABP04908 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 AC012617.1-204ENST00000586340 2305 ntBASIC13.28□□□□□ -0.28
HIST1H2ABP04908 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H2ABP04908 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.27□□□□□ -0.28
HIST1H2ABP04908 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 AC092933.1-201ENST00000393644 945 ntBASIC13.27□□□□□ -0.29
HIST1H2ABP04908 AC004945.1-201ENST00000416738 983 ntBASIC13.27□□□□□ -0.29
HIST1H2ABP04908 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 AL035414.1-201ENST00000451327 857 ntBASIC13.27□□□□□ -0.29
HIST1H2ABP04908 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 SORD2P-201ENST00000558556 1069 ntBASIC13.27□□□□□ -0.29
HIST1H2ABP04908 AL596325.1-201ENST00000563991 1082 ntBASIC13.27□□□□□ -0.29
HIST1H2ABP04908 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 CU639417.3-201ENST00000624240 1404 ntBASIC13.27□□□□□ -0.29
HIST1H2ABP04908 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 AC011498.7-201ENST00000624986 2027 ntBASIC13.27□□□□□ -0.29
HIST1H2ABP04908 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.27□□□□□ -0.29
HIST1H2ABP04908 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST1H2ABP04908 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms