Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-CO1P00395 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
MT-CO1P00395 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.87□□□□□ -0.03
MT-CO1P00395 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.87□□□□□ -0.03
MT-CO1P00395 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-CO1P00395 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
MT-CO1P00395 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MT-CO1P00395 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-CO1P00395 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.87□□□□□ -0.03
MT-CO1P00395 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
MT-CO1P00395 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-CO1P00395 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MT-CO1P00395 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MT-CO1P00395 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-CO1P00395 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-CO1P00395 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.86□□□□□ -0.03
MT-CO1P00395 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-CO1P00395 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 AC125604.1-201ENST00000496255 707 ntBASIC14.86□□□□□ -0.03
MT-CO1P00395 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.86□□□□□ -0.03
MT-CO1P00395 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.86□□□□□ -0.03
MT-CO1P00395 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
MT-CO1P00395 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.86□□□□□ -0.03
MT-CO1P00395 AL132994.2-201ENST00000603120 687 ntBASIC14.86□□□□□ -0.03
MT-CO1P00395 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.86□□□□□ -0.03
MT-CO1P00395 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.86□□□□□ -0.03
MT-CO1P00395 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 AC215219.1-201ENST00000400706 1817 ntBASIC14.86□□□□□ -0.03
MT-CO1P00395 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.86□□□□□ -0.03
MT-CO1P00395 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-CO1P00395 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
MT-CO1P00395 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-CO1P00395 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
MT-CO1P00395 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-CO1P00395 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-CO1P00395 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-CO1P00395 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.85□□□□□ -0.03
MT-CO1P00395 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
MT-CO1P00395 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
MT-CO1P00395 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.85□□□□□ -0.03
MT-CO1P00395 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.85□□□□□ -0.03
MT-CO1P00395 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.85□□□□□ -0.03
MT-CO1P00395 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.85□□□□□ -0.03
MT-CO1P00395 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.85□□□□□ -0.03
MT-CO1P00395 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.85□□□□□ -0.03
MT-CO1P00395 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.85□□□□□ -0.03
MT-CO1P00395 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
MT-CO1P00395 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MT-CO1P00395 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-CO1P00395 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-CO1P00395 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-CO1P00395 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MT-CO1P00395 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms