Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.94□□□□□ -0.34
CNOT4O95628 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.94□□□□□ -0.34
CNOT4O95628 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.94□□□□□ -0.34
CNOT4O95628 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CNOT4O95628 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CNOT4O95628 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.93□□□□□ -0.34
CNOT4O95628 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.93□□□□□ -0.34
CNOT4O95628 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
CNOT4O95628 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CNOT4O95628 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CNOT4O95628 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CNOT4O95628 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CNOT4O95628 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.93□□□□□ -0.34
CNOT4O95628 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.93□□□□□ -0.34
CNOT4O95628 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.93□□□□□ -0.34
CNOT4O95628 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.93□□□□□ -0.34
CNOT4O95628 MPRIPP1-201ENST00000452433 1089 ntBASIC12.93□□□□□ -0.34
CNOT4O95628 RN7SL769P-201ENST00000469386 295 ntBASIC12.93□□□□□ -0.34
CNOT4O95628 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
CNOT4O95628 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.93□□□□□ -0.34
CNOT4O95628 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.93□□□□□ -0.34
CNOT4O95628 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.93□□□□□ -0.34
CNOT4O95628 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.93□□□□□ -0.34
CNOT4O95628 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
CNOT4O95628 AL451050.2-201ENST00000606967 682 ntBASIC12.93□□□□□ -0.34
CNOT4O95628 AC068587.8-201ENST00000641239 219 ntBASIC12.93□□□□□ -0.34
CNOT4O95628 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.93□□□□□ -0.34
CNOT4O95628 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 AC107918.4-201ENST00000641966 3141 ntBASIC12.93□□□□□ -0.34
CNOT4O95628 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CNOT4O95628 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.93□□□□□ -0.34
CNOT4O95628 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 KRT8P28-201ENST00000433288 1390 ntBASIC12.93□□□□□ -0.34
CNOT4O95628 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.93□□□□□ -0.34
CNOT4O95628 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.93□□□□□ -0.34
CNOT4O95628 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.93□□□□□ -0.34
CNOT4O95628 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CNOT4O95628 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CNOT4O95628 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CNOT4O95628 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.93□□□□□ -0.34
CNOT4O95628 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.92□□□□□ -0.34
CNOT4O95628 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
CNOT4O95628 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CNOT4O95628 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.92□□□□□ -0.34
CNOT4O95628 FXNP2-201ENST00000411625 547 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms