Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.88□□□□□ -0.19
PDLIM1O00151 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PDLIM1O00151 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM1O00151 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM1O00151 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM1O00151 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.88□□□□□ -0.19
PDLIM1O00151 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDLIM1O00151 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PDLIM1O00151 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDLIM1O00151 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.87□□□□□ -0.19
PDLIM1O00151 HERC2P10-201ENST00000570209 2393 ntBASIC13.87□□□□□ -0.19
PDLIM1O00151 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDLIM1O00151 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PDLIM1O00151 AC018445.4-201ENST00000624066 2291 ntBASIC13.87□□□□□ -0.19
PDLIM1O00151 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PDLIM1O00151 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDLIM1O00151 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 AC011840.2-201ENST00000563063 1520 ntBASIC13.87□□□□□ -0.19
PDLIM1O00151 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 DFFBP1-201ENST00000433250 979 ntBASIC13.87□□□□□ -0.19
PDLIM1O00151 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PDLIM1O00151 TIMM17BP1-201ENST00000545713 516 ntBASIC13.87□□□□□ -0.19
PDLIM1O00151 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.87□□□□□ -0.19
PDLIM1O00151 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
PDLIM1O00151 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 AC099568.2-201ENST00000609194 695 ntBASIC13.87□□□□□ -0.19
PDLIM1O00151 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM1O00151 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM1O00151 AC015819.3-201ENST00000624305 2674 ntBASIC13.87□□□□□ -0.19
PDLIM1O00151 CLK3P2-201ENST00000427566 1453 ntBASIC13.87□□□□□ -0.19
PDLIM1O00151 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM1O00151 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM1O00151 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PDLIM1O00151 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM1O00151 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PDLIM1O00151 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.86□□□□□ -0.19
PDLIM1O00151 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.86□□□□□ -0.19
PDLIM1O00151 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.86□□□□□ -0.19
PDLIM1O00151 MEP1AP4-201ENST00000423244 1087 ntBASIC13.86□□□□□ -0.19
PDLIM1O00151 CRB3P1-201ENST00000449338 276 ntBASIC13.86□□□□□ -0.19
PDLIM1O00151 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PDLIM1O00151 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM1O00151 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.86□□□□□ -0.19
PDLIM1O00151 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM1O00151 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.86□□□□□ -0.19
PDLIM1O00151 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.86□□□□□ -0.19
PDLIM1O00151 API5-211ENST00000534695 560 ntTSL 5 BASIC13.86□□□□□ -0.19
PDLIM1O00151 AC023310.3-201ENST00000557027 670 ntBASIC13.86□□□□□ -0.19
PDLIM1O00151 AC100756.1-201ENST00000562736 682 ntBASIC13.86□□□□□ -0.19
PDLIM1O00151 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.86□□□□□ -0.19
PDLIM1O00151 AC138749.3-201ENST00000567691 622 ntBASIC13.86□□□□□ -0.19
PDLIM1O00151 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM1O00151 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.86□□□□□ -0.19
PDLIM1O00151 SPDYE22P-201ENST00000582158 798 ntBASIC13.86□□□□□ -0.19
PDLIM1O00151 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM1O00151 AC004233.3-201ENST00000607794 1269 ntBASIC13.86□□□□□ -0.19
PDLIM1O00151 AC116165.1-201ENST00000611806 668 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms