Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 CICP24-201ENST00000605464 2705 ntBASIC9.91□□□□□ -0.82
LINC00588Q9Y4M8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 KRT18P9-201ENST00000604826 1300 ntBASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 JTB-202ENST00000356648 1040 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 BANF1P3-201ENST00000412556 261 ntBASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 AC092580.1-201ENST00000433998 658 ntBASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 PRKXP1-201ENST00000561423 1122 ntBASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 COG4-212ENST00000564653 590 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 PHBP15-201ENST00000574228 665 ntBASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 AC007718.1-201ENST00000621078 280 ntBASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00588Q9Y4M8 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC9.9□□□□□ -0.83
LINC00588Q9Y4M8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC9.9□□□□□ -0.83
LINC00588Q9Y4M8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00588Q9Y4M8 AL137784.3-201ENST00000623858 2288 ntBASIC9.9□□□□□ -0.83
LINC00588Q9Y4M8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC9.9□□□□□ -0.83
LINC00588Q9Y4M8 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC9.9□□□□□ -0.83
LINC00588Q9Y4M8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00588Q9Y4M8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00588Q9Y4M8 AL365209.1-201ENST00000624418 6473 ntBASIC9.9□□□□□ -0.83
LINC00588Q9Y4M8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC9.9□□□□□ -0.83
LINC00588Q9Y4M8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00588Q9Y4M8 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms