Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 GALP-202ENST00000440823 889 ntTSL 5 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 AC007279.1-201ENST00000448547 837 ntBASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 AC063952.3-201ENST00000467756 308 ntBASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 MT3-202ENST00000561640 514 ntTSL 3 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 ESR1-214ENST00000638569 132 ntTSL 5 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 AC097359.2-201ENST00000604992 2389 ntBASIC20.85■□□□□ 0.93
SHANK2Q9UPX8 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 MIR1307-201ENST00000408840 149 ntBASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 GOLGA2P7-209ENST00000560408 745 ntBASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 AL160191.2-201ENST00000603975 601 ntBASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 AC005274.1-201ENST00000623460 802 ntBASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 NRADDP-202ENST00000641269 1585 ntBASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHANK2Q9UPX8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 SNX15-201ENST00000352068 771 ntTSL 5 BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 ASS1P2-201ENST00000439895 1223 ntBASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 AL451000.1-201ENST00000451300 1186 ntBASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 Z98885.3-201ENST00000624882 1757 ntBASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHANK2Q9UPX8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
SHANK2Q9UPX8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHANK2Q9UPX8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHANK2Q9UPX8 FMO6P-201ENST00000236166 1620 ntBASIC20.83■□□□□ 0.92
SHANK2Q9UPX8 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC20.83■□□□□ 0.92
SHANK2Q9UPX8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHANK2Q9UPX8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.83■□□□□ 0.92
SHANK2Q9UPX8 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC20.83■□□□□ 0.92
SHANK2Q9UPX8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SHANK2Q9UPX8 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SHANK2Q9UPX8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SHANK2Q9UPX8 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 RPL10-203ENST00000406022 748 ntTSL 3 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 NALT1-202ENST00000450304 437 ntTSL 3 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 HNRNPA1P42-201ENST00000458678 957 ntBASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC20.82■□□□□ 0.92
SHANK2Q9UPX8 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms