Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
COPS3Q9UNS2 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 AL031595.1-201ENST00000623969 4709 ntBASIC12.98□□□□□ -0.33
COPS3Q9UNS2 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 AC073548.1-201ENST00000624088 1882 ntBASIC12.98□□□□□ -0.33
COPS3Q9UNS2 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 RFPL4AP1-201ENST00000530883 850 ntBASIC12.98□□□□□ -0.33
COPS3Q9UNS2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 WFDC1-204ENST00000613603 549 ntBASIC12.98□□□□□ -0.33
COPS3Q9UNS2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.98□□□□□ -0.33
COPS3Q9UNS2 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 AL391825.1-201ENST00000457671 1364 ntBASIC12.97□□□□□ -0.33
COPS3Q9UNS2 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 INGX-202ENST00000489074 768 ntBASIC12.97□□□□□ -0.33
COPS3Q9UNS2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 WASH4P-201ENST00000564273 1246 ntBASIC12.97□□□□□ -0.33
COPS3Q9UNS2 AC145423.3-201ENST00000615987 467 ntBASIC12.97□□□□□ -0.33
COPS3Q9UNS2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COPS3Q9UNS2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms