Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC134312.5-201ENST00000568031 1313 ntBASIC14.28□□□□□ -0.12
MKS1Q9NXB0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 CTBP2P3-201ENST00000585629 1255 ntBASIC14.28□□□□□ -0.12
MKS1Q9NXB0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 Z98257.2-202ENST00000641138 1548 ntBASIC14.28□□□□□ -0.12
MKS1Q9NXB0 AL365209.1-201ENST00000624418 6473 ntBASIC14.28□□□□□ -0.12
MKS1Q9NXB0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
MKS1Q9NXB0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 MSNP1-201ENST00000511640 1732 ntBASIC14.27□□□□□ -0.12
MKS1Q9NXB0 AC108024.1-201ENST00000626286 1721 ntBASIC14.27□□□□□ -0.12
MKS1Q9NXB0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.27□□□□□ -0.12
MKS1Q9NXB0 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 LAP3P2-201ENST00000454686 1454 ntBASIC14.27□□□□□ -0.12
MKS1Q9NXB0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.27□□□□□ -0.12
MKS1Q9NXB0 TPM3P8-201ENST00000330554 643 ntBASIC14.27□□□□□ -0.13
MKS1Q9NXB0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 AC010141.1-201ENST00000411585 623 ntBASIC14.27□□□□□ -0.13
MKS1Q9NXB0 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 AC132938.4-201ENST00000623835 848 ntBASIC14.27□□□□□ -0.13
MKS1Q9NXB0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 LINC02486-201ENST00000604157 3000 ntBASIC14.27□□□□□ -0.13
MKS1Q9NXB0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MKS1Q9NXB0 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MKS1Q9NXB0 RCC2P1-201ENST00000452257 1476 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms