Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 AC136604.1-202ENST00000425471 771 ntBASIC11.8□□□□□ -0.52
RAB40CQ96S21 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 VDAC1P7-201ENST00000462417 847 ntBASIC11.8□□□□□ -0.52
RAB40CQ96S21 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 AC138761.1-201ENST00000584393 385 ntBASIC11.8□□□□□ -0.52
RAB40CQ96S21 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 AP001002.3-201ENST00000623482 206 ntBASIC11.8□□□□□ -0.52
RAB40CQ96S21 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 BTBD7P1-201ENST00000447253 1453 ntBASIC11.79□□□□□ -0.52
RAB40CQ96S21 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 AP002761.4-201ENST00000565433 3361 ntBASIC11.79□□□□□ -0.52
RAB40CQ96S21 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 MIR943-201ENST00000401286 94 ntBASIC11.79□□□□□ -0.52
RAB40CQ96S21 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB40CQ96S21 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.79□□□□□ -0.52
RAB40CQ96S21 BAP1-211ENST00000615113 489 ntBASIC11.79□□□□□ -0.52
RAB40CQ96S21 AC007431.3-201ENST00000623221 587 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms