Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 AC145098.2-201ENST00000623593 3026 ntBASIC13.68□□□□□ -0.22
NR1H4Q96RI1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR1H4Q96RI1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 AC112191.1-201ENST00000523689 701 ntBASIC13.67□□□□□ -0.22
NR1H4Q96RI1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 PDPK2P-202ENST00000562415 1191 ntBASIC13.67□□□□□ -0.22
NR1H4Q96RI1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 AL138918.1-201ENST00000568306 659 ntBASIC13.67□□□□□ -0.22
NR1H4Q96RI1 AP002472.1-201ENST00000577490 586 ntBASIC13.67□□□□□ -0.22
NR1H4Q96RI1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 AC092865.6-201ENST00000642101 219 ntBASIC13.67□□□□□ -0.22
NR1H4Q96RI1 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.67□□□□□ -0.22
NR1H4Q96RI1 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 AL137783.1-201ENST00000623494 1896 ntBASIC13.66□□□□□ -0.22
NR1H4Q96RI1 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 TARDBPP1-201ENST00000442013 1203 ntBASIC13.66□□□□□ -0.22
NR1H4Q96RI1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 AC120114.3-201ENST00000611923 658 ntBASIC13.66□□□□□ -0.22
NR1H4Q96RI1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms