Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 AC007191.1-201ENST00000623179 2995 ntBASIC16.94■□□□□ 0.3
TRIM47Q96LD4 AC015656.1-201ENST00000624209 3578 ntBASIC16.94■□□□□ 0.3
TRIM47Q96LD4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 CYP4F23P-201ENST00000593402 1579 ntBASIC16.94■□□□□ 0.3
TRIM47Q96LD4 AC005912.2-201ENST00000619492 2400 ntBASIC16.94■□□□□ 0.3
TRIM47Q96LD4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 LYPLA2P1-203ENST00000447689 696 ntBASIC16.93■□□□□ 0.3
TRIM47Q96LD4 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 AC093752.3-201ENST00000567343 901 ntBASIC16.93■□□□□ 0.3
TRIM47Q96LD4 AC107464.3-201ENST00000609172 737 ntBASIC16.93■□□□□ 0.3
TRIM47Q96LD4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 AC005618.3-201ENST00000624928 458 ntBASIC16.93■□□□□ 0.3
TRIM47Q96LD4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 AC092299.1-201ENST00000632679 757 ntBASIC16.93■□□□□ 0.3
TRIM47Q96LD4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 AC005089.1-201ENST00000619486 2241 ntBASIC16.93■□□□□ 0.3
TRIM47Q96LD4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM47Q96LD4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 AC139749.1-202ENST00000617529 3139 ntBASIC16.92■□□□□ 0.3
TRIM47Q96LD4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 MTHFR-210ENST00000641407 2387 ntBASIC16.92■□□□□ 0.3
TRIM47Q96LD4 AC018529.2-202ENST00000611482 3087 ntBASIC16.92■□□□□ 0.3
TRIM47Q96LD4 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 CICP12-201ENST00000455801 843 ntBASIC16.92■□□□□ 0.3
TRIM47Q96LD4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 AC084781.1-201ENST00000613737 656 ntBASIC16.92■□□□□ 0.3
TRIM47Q96LD4 AC138466.4-201ENST00000623965 852 ntBASIC16.92■□□□□ 0.3
TRIM47Q96LD4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms