Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 YBX2P1-201ENST00000394192 760 ntBASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 AC003101.2-201ENST00000612557 442 ntBASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 AC055717.3-201ENST00000622967 595 ntBASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 AC004623.1-201ENST00000624592 2127 ntBASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 TP73-201ENST00000346387 4854 ntTSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 GHET1-201ENST00000627071 1906 ntBASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 AP001972.5-201ENST00000624624 2338 ntBASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 AL035456.1-201ENST00000456064 1369 ntBASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 AGGF1P10-201ENST00000635005 2191 ntBASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms