Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.18■□□□□ 0.5
PROM2Q8N271 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC18.18■□□□□ 0.5
PROM2Q8N271 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 RHOC-205ENST00000369636 786 ntTSL 2 BASIC18.18■□□□□ 0.5
PROM2Q8N271 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PROM2Q8N271 OLA1P2-201ENST00000395519 1264 ntBASIC18.18■□□□□ 0.5
PROM2Q8N271 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 AC073210.1-201ENST00000414799 232 ntBASIC18.18■□□□□ 0.5
PROM2Q8N271 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC18.18■□□□□ 0.5
PROM2Q8N271 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC18.18■□□□□ 0.5
PROM2Q8N271 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC18.18■□□□□ 0.5
PROM2Q8N271 AL022319.1-201ENST00000458183 1167 ntBASIC18.18■□□□□ 0.5
PROM2Q8N271 AC090680.1-201ENST00000464696 860 ntBASIC18.18■□□□□ 0.5
PROM2Q8N271 DPY19L2P4-201ENST00000479881 442 ntBASIC18.18■□□□□ 0.5
PROM2Q8N271 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PROM2Q8N271 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC18.18■□□□□ 0.5
PROM2Q8N271 AC084262.1-201ENST00000567818 751 ntBASIC18.18■□□□□ 0.5
PROM2Q8N271 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC18.18■□□□□ 0.5
PROM2Q8N271 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC18.18■□□□□ 0.5
PROM2Q8N271 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC18.18■□□□□ 0.5
PROM2Q8N271 AC005865.2-202ENST00000635814 725 ntBASIC18.18■□□□□ 0.5
PROM2Q8N271 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.18■□□□□ 0.5
PROM2Q8N271 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 FAM226B-201ENST00000602508 1490 ntBASIC18.18■□□□□ 0.5
PROM2Q8N271 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.18■□□□□ 0.5
PROM2Q8N271 C18orf15-201ENST00000623680 2534 ntBASIC18.18■□□□□ 0.5
PROM2Q8N271 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PROM2Q8N271 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.18■□□□□ 0.5
PROM2Q8N271 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PROM2Q8N271 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.18■□□□□ 0.5
PROM2Q8N271 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.17■□□□□ 0.5
PROM2Q8N271 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PROM2Q8N271 AC117503.4-201ENST00000623229 1418 ntBASIC18.17■□□□□ 0.5
PROM2Q8N271 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
PROM2Q8N271 AC015688.4-201ENST00000580780 1647 ntBASIC18.17■□□□□ 0.5
PROM2Q8N271 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.17■□□□□ 0.5
PROM2Q8N271 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 SIRPB3P-201ENST00000340424 1216 ntBASIC18.17■□□□□ 0.5
PROM2Q8N271 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PROM2Q8N271 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC18.17■□□□□ 0.5
PROM2Q8N271 ZNF877P-201ENST00000437614 612 ntBASIC18.17■□□□□ 0.5
PROM2Q8N271 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC18.17■□□□□ 0.5
PROM2Q8N271 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC18.17■□□□□ 0.5
PROM2Q8N271 RN7SL578P-201ENST00000477781 283 ntBASIC18.17■□□□□ 0.5
PROM2Q8N271 LY6E-215ENST00000523847 427 ntTSL 3 BASIC18.17■□□□□ 0.5
PROM2Q8N271 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC18.17■□□□□ 0.5
PROM2Q8N271 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC18.17■□□□□ 0.5
PROM2Q8N271 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PROM2Q8N271 AC016597.2-201ENST00000613256 341 ntBASIC18.17■□□□□ 0.5
PROM2Q8N271 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC18.17■□□□□ 0.5
PROM2Q8N271 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC18.17■□□□□ 0.5
PROM2Q8N271 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.17■□□□□ 0.5
PROM2Q8N271 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.17■□□□□ 0.5
PROM2Q8N271 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.17■□□□□ 0.5
PROM2Q8N271 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PROM2Q8N271 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PROM2Q8N271 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM2Q8N271 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.16■□□□□ 0.5
PROM2Q8N271 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PROM2Q8N271 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.16■□□□□ 0.5
PROM2Q8N271 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PROM2Q8N271 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms