Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 AL603841.1-201ENST00000430516 664 ntBASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 AC006033.1-201ENST00000440505 426 ntBASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 AP001258.2-201ENST00000529891 490 ntBASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 AC124068.2-201ENST00000569473 1109 ntBASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 AC104506.1-201ENST00000609247 429 ntBASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 AL022313.4-201ENST00000562756 2046 ntBASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 C8orf49-201ENST00000525043 1968 ntBASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 AC016397.2-201ENST00000624848 1985 ntBASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 KRT18P36-201ENST00000411618 1276 ntBASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 AC106794.1-201ENST00000506935 792 ntBASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 ZNF767P-206ENST00000513792 565 ntBASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 AL136295.7-201ENST00000619226 1200 ntBASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SCUBE3Q8IX30 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 SLC25A24P2-201ENST00000415059 510 ntBASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.23■□□□□ 0.03
SCUBE3Q8IX30 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms