Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC19.71■□□□□ 0.75
UBR1Q8IWV7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
UBR1Q8IWV7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 AL513477.1-201ENST00000602865 2407 ntBASIC19.7■□□□□ 0.74
UBR1Q8IWV7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 IGHVII-74-1-201ENST00000517572 241 ntBASIC19.7■□□□□ 0.74
UBR1Q8IWV7 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC19.7■□□□□ 0.74
UBR1Q8IWV7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 KRT8P38-201ENST00000441370 1430 ntBASIC19.69■□□□□ 0.74
UBR1Q8IWV7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 FAM86JP-202ENST00000484500 988 ntBASIC19.69■□□□□ 0.74
UBR1Q8IWV7 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 RN7SL300P-201ENST00000582522 318 ntBASIC19.69■□□□□ 0.74
UBR1Q8IWV7 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBR1Q8IWV7 GUCY2EP-203ENST00000531117 1918 ntBASIC19.69■□□□□ 0.74
UBR1Q8IWV7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 TCAF2P1-201ENST00000291129 2421 ntBASIC19.68■□□□□ 0.74
UBR1Q8IWV7 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 SLC25A15P1-201ENST00000456738 342 ntBASIC19.68■□□□□ 0.74
UBR1Q8IWV7 AC113398.1-201ENST00000464124 406 ntBASIC19.68■□□□□ 0.74
UBR1Q8IWV7 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 CDC37P2-201ENST00000562287 1029 ntBASIC19.68■□□□□ 0.74
UBR1Q8IWV7 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 KRT8P25-201ENST00000473150 1456 ntBASIC19.68■□□□□ 0.74
UBR1Q8IWV7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC19.68■□□□□ 0.74
UBR1Q8IWV7 CASP2-203ENST00000392925 616 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms