Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 POM121L10P-201ENST00000436994 1285 ntBASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 AC126915.1-201ENST00000522847 1038 ntBASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 AC026740.1-201ENST00000607068 791 ntBASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 AC244157.2-201ENST00000616239 1006 ntBASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 AC018735.1-201ENST00000437208 1502 ntBASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.23■□□□□ 0.19
HERC4Q5GLZ8 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 MIR769-201ENST00000390225 118 ntBASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 AL355334.1-201ENST00000417713 215 ntBASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 AC079178.1-201ENST00000420915 656 ntBASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 AC027237.1-201ENST00000560942 655 ntBASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 AL353726.2-201ENST00000623259 884 ntBASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.22■□□□□ 0.19
HERC4Q5GLZ8 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 CYP46A4P-201ENST00000414953 267 ntBASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 AC132192.2-201ENST00000596206 1147 ntBASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 AC020910.6-201ENST00000623084 1459 ntBASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HERC4Q5GLZ8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HERC4Q5GLZ8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HERC4Q5GLZ8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HERC4Q5GLZ8 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.21■□□□□ 0.18
HERC4Q5GLZ8 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
HERC4Q5GLZ8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HERC4Q5GLZ8 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HERC4Q5GLZ8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.2■□□□□ 0.18
HERC4Q5GLZ8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.2■□□□□ 0.18
HERC4Q5GLZ8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HERC4Q5GLZ8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HERC4Q5GLZ8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms