Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.62■□□□□ 0.41
DDR1Q08345 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.62■□□□□ 0.41
DDR1Q08345 PAUPAR-201ENST00000630360 2965 ntBASIC17.62■□□□□ 0.41
DDR1Q08345 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
DDR1Q08345 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC17.62■□□□□ 0.41
DDR1Q08345 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
DDR1Q08345 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.62■□□□□ 0.41
DDR1Q08345 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDR1Q08345 AC008536.3-201ENST00000623282 1599 ntBASIC17.62■□□□□ 0.41
DDR1Q08345 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
DDR1Q08345 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
DDR1Q08345 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.61■□□□□ 0.41
DDR1Q08345 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 AGAP7P-201ENST00000582299 2062 ntBASIC17.61■□□□□ 0.41
DDR1Q08345 AGAP14-201ENST00000624701 2060 ntBASIC17.61■□□□□ 0.41
DDR1Q08345 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC17.61■□□□□ 0.41
DDR1Q08345 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.61■□□□□ 0.41
DDR1Q08345 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
DDR1Q08345 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.61■□□□□ 0.41
DDR1Q08345 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.61■□□□□ 0.41
DDR1Q08345 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.61■□□□□ 0.41
DDR1Q08345 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.61■□□□□ 0.41
DDR1Q08345 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
DDR1Q08345 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 URAHP-205ENST00000610227 398 ntBASIC17.61■□□□□ 0.41
DDR1Q08345 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 AC007952.5-201ENST00000572818 1486 ntBASIC17.61■□□□□ 0.41
DDR1Q08345 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDR1Q08345 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.61■□□□□ 0.41
DDR1Q08345 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.61■□□□□ 0.41
DDR1Q08345 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
DDR1Q08345 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.6■□□□□ 0.41
DDR1Q08345 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
DDR1Q08345 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.6■□□□□ 0.41
DDR1Q08345 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DDR1Q08345 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.6■□□□□ 0.41
DDR1Q08345 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
DDR1Q08345 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.6■□□□□ 0.41
DDR1Q08345 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 AL157823.1-201ENST00000403727 628 ntBASIC17.6■□□□□ 0.41
DDR1Q08345 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.6■□□□□ 0.41
DDR1Q08345 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC17.6■□□□□ 0.41
DDR1Q08345 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
DDR1Q08345 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC17.6■□□□□ 0.41
DDR1Q08345 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 AC078814.4-201ENST00000546650 327 ntBASIC17.6■□□□□ 0.41
DDR1Q08345 ANKRD26P1-203ENST00000569528 966 ntBASIC17.6■□□□□ 0.41
DDR1Q08345 FBXO36P1-201ENST00000579006 471 ntBASIC17.6■□□□□ 0.41
DDR1Q08345 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC17.6■□□□□ 0.41
DDR1Q08345 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC17.6■□□□□ 0.41
DDR1Q08345 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC17.6■□□□□ 0.41
DDR1Q08345 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC17.6■□□□□ 0.41
DDR1Q08345 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 RPL13AP3-202ENST00000494676 1473 ntBASIC17.6■□□□□ 0.41
DDR1Q08345 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.6■□□□□ 0.41
DDR1Q08345 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
DDR1Q08345 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DDR1Q08345 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms