Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SKOR1P84550 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.3■□□□□ 0.04
SKOR1P84550 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.3■□□□□ 0.04
SKOR1P84550 AC091917.2-201ENST00000505002 744 ntBASIC15.3■□□□□ 0.04
SKOR1P84550 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.3■□□□□ 0.04
SKOR1P84550 SLC25A47P1-201ENST00000531577 414 ntBASIC15.3■□□□□ 0.04
SKOR1P84550 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SKOR1P84550 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SKOR1P84550 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
SKOR1P84550 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.3■□□□□ 0.04
SKOR1P84550 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SKOR1P84550 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SKOR1P84550 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SKOR1P84550 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SKOR1P84550 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.3■□□□□ 0.04
SKOR1P84550 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SKOR1P84550 AC004466.1-201ENST00000599515 1080 ntBASIC15.3■□□□□ 0.04
SKOR1P84550 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SKOR1P84550 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SKOR1P84550 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.3■□□□□ 0.04
SKOR1P84550 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SKOR1P84550 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SKOR1P84550 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SKOR1P84550 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SKOR1P84550 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.29■□□□□ 0.04
SKOR1P84550 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 AP002761.4-201ENST00000565433 3361 ntBASIC15.29■□□□□ 0.04
SKOR1P84550 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SKOR1P84550 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.29■□□□□ 0.04
SKOR1P84550 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SKOR1P84550 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.29■□□□□ 0.04
SKOR1P84550 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.29■□□□□ 0.04
SKOR1P84550 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.29■□□□□ 0.04
SKOR1P84550 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.29■□□□□ 0.04
SKOR1P84550 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SKOR1P84550 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.29■□□□□ 0.04
SKOR1P84550 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SKOR1P84550 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SKOR1P84550 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SKOR1P84550 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.29■□□□□ 0.04
SKOR1P84550 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
SKOR1P84550 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SKOR1P84550 AC087386.2-201ENST00000623212 4637 ntBASIC15.29■□□□□ 0.04
SKOR1P84550 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SKOR1P84550 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SKOR1P84550 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.29■□□□□ 0.04
SKOR1P84550 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SKOR1P84550 AL138709.1-201ENST00000614840 1693 ntBASIC15.28■□□□□ 0.04
SKOR1P84550 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SKOR1P84550 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SKOR1P84550 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SKOR1P84550 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SKOR1P84550 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SKOR1P84550 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SKOR1P84550 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.28■□□□□ 0.04
SKOR1P84550 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.28■□□□□ 0.04
SKOR1P84550 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SKOR1P84550 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SKOR1P84550 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SKOR1P84550 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SKOR1P84550 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SKOR1P84550 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SKOR1P84550 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SKOR1P84550 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SKOR1P84550 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.28■□□□□ 0.04
SKOR1P84550 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.28■□□□□ 0.04
SKOR1P84550 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.28■□□□□ 0.04
SKOR1P84550 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.28■□□□□ 0.04
SKOR1P84550 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SKOR1P84550 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.28■□□□□ 0.04
SKOR1P84550 BNIP3P42-201ENST00000454982 569 ntBASIC15.28■□□□□ 0.04
SKOR1P84550 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.28■□□□□ 0.04
SKOR1P84550 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.28■□□□□ 0.04
SKOR1P84550 AC104989.1-201ENST00000519711 778 ntBASIC15.28■□□□□ 0.04
SKOR1P84550 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms