Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
HTTP42858 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 AC005586.2-201ENST00000563946 837 ntBASIC15.62■□□□□ 0.09
HTTP42858 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC15.62■□□□□ 0.09
HTTP42858 PPY-202ENST00000587006 431 ntTSL 3 BASIC15.62■□□□□ 0.09
HTTP42858 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HTTP42858 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.62■□□□□ 0.09
HTTP42858 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HTTP42858 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HTTP42858 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
HTTP42858 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC15.62■□□□□ 0.09
HTTP42858 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC15.62■□□□□ 0.09
HTTP42858 MIR5091-201ENST00000578707 93 ntBASIC15.62■□□□□ 0.09
HTTP42858 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC15.62■□□□□ 0.09
HTTP42858 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
HTTP42858 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HTTP42858 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HTTP42858 AL022313.4-201ENST00000562756 2046 ntBASIC15.62■□□□□ 0.09
HTTP42858 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.62■□□□□ 0.09
HTTP42858 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTTP42858 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HTTP42858 RPL10P8-201ENST00000522888 313 ntBASIC15.61■□□□□ 0.09
HTTP42858 PHBP18-201ENST00000546648 813 ntBASIC15.61■□□□□ 0.09
HTTP42858 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.61■□□□□ 0.09
HTTP42858 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTTP42858 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.61■□□□□ 0.09
HTTP42858 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC15.61■□□□□ 0.09
HTTP42858 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC15.61■□□□□ 0.09
HTTP42858 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.61■□□□□ 0.09
HTTP42858 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.61■□□□□ 0.09
HTTP42858 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC15.61■□□□□ 0.09
HTTP42858 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HTTP42858 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HTTP42858 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTTP42858 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HTTP42858 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HTTP42858 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTTP42858 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTTP42858 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
HTTP42858 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HTTP42858 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.61■□□□□ 0.09
HTTP42858 OR7E155P-201ENST00000412208 1014 ntBASIC15.61■□□□□ 0.09
HTTP42858 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC15.61■□□□□ 0.09
HTTP42858 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HTTP42858 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
HTTP42858 MIR6165-201ENST00000614803 84 ntBASIC15.61■□□□□ 0.09
HTTP42858 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.61■□□□□ 0.09
HTTP42858 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HTTP42858 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HTTP42858 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC15.6■□□□□ 0.09
HTTP42858 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
HTTP42858 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HTTP42858 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.6■□□□□ 0.09
HTTP42858 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
HTTP42858 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC15.6■□□□□ 0.09
HTTP42858 HNRNPA3P12-201ENST00000437410 1063 ntBASIC15.6■□□□□ 0.09
HTTP42858 RN7SL838P-201ENST00000481676 295 ntBASIC15.6■□□□□ 0.09
HTTP42858 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC15.6■□□□□ 0.09
HTTP42858 AC099343.1-201ENST00000513481 609 ntBASIC15.6■□□□□ 0.09
HTTP42858 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC15.6■□□□□ 0.09
HTTP42858 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.6■□□□□ 0.09
HTTP42858 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HTTP42858 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.6■□□□□ 0.09
HTTP42858 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 SFPQP1-201ENST00000446621 1786 ntBASIC15.6■□□□□ 0.09
HTTP42858 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC15.6■□□□□ 0.09
HTTP42858 GULOP-201ENST00000454030 748 ntBASIC15.6■□□□□ 0.09
HTTP42858 RN7SL87P-201ENST00000497657 288 ntBASIC15.6■□□□□ 0.09
HTTP42858 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC15.6■□□□□ 0.09
HTTP42858 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC15.6■□□□□ 0.09
HTTP42858 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HTTP42858 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms