Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLCN1P35523 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC16.54■□□□□ 0.24
CLCN1P35523 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CLCN1P35523 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCN1P35523 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.54■□□□□ 0.24
CLCN1P35523 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CLCN1P35523 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.54■□□□□ 0.24
CLCN1P35523 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.54■□□□□ 0.24
CLCN1P35523 AC093214.1-201ENST00000511688 1107 ntBASIC16.54■□□□□ 0.24
CLCN1P35523 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.54■□□□□ 0.24
CLCN1P35523 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC16.54■□□□□ 0.24
CLCN1P35523 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCN1P35523 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.54■□□□□ 0.24
CLCN1P35523 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC16.54■□□□□ 0.24
CLCN1P35523 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 AL357140.3-201ENST00000639753 1983 ntBASIC16.54■□□□□ 0.24
CLCN1P35523 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCN1P35523 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLCN1P35523 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.54■□□□□ 0.24
CLCN1P35523 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCN1P35523 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 AC022400.8-201ENST00000623453 3599 ntBASIC16.54■□□□□ 0.24
CLCN1P35523 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC16.54■□□□□ 0.24
CLCN1P35523 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCN1P35523 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCN1P35523 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLCN1P35523 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC16.54■□□□□ 0.24
CLCN1P35523 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC16.54■□□□□ 0.24
CLCN1P35523 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN1P35523 AC099521.2-201ENST00000619354 2036 ntBASIC16.53■□□□□ 0.24
CLCN1P35523 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CLCN1P35523 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLCN1P35523 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCN1P35523 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCN1P35523 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.53■□□□□ 0.24
CLCN1P35523 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 AC145098.2-201ENST00000623593 3026 ntBASIC16.53■□□□□ 0.24
CLCN1P35523 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLCN1P35523 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLCN1P35523 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 BASP1P1-201ENST00000430708 665 ntBASIC16.53■□□□□ 0.24
CLCN1P35523 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCN1P35523 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.53■□□□□ 0.24
CLCN1P35523 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.53■□□□□ 0.24
CLCN1P35523 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC16.53■□□□□ 0.24
CLCN1P35523 AC060766.1-201ENST00000590824 627 ntBASIC16.53■□□□□ 0.24
CLCN1P35523 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCN1P35523 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 PI4KAP2-201ENST00000360806 2080 ntBASIC16.53■□□□□ 0.24
CLCN1P35523 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCN1P35523 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CLCN1P35523 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLCN1P35523 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.53■□□□□ 0.24
CLCN1P35523 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLCN1P35523 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN1P35523 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN1P35523 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN1P35523 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN1P35523 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN1P35523 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms